diff options
Diffstat (limited to 'academic/pysam/pysam.SlackBuild')
| -rw-r--r-- | academic/pysam/pysam.SlackBuild | 7 |
1 files changed, 2 insertions, 5 deletions
diff --git a/academic/pysam/pysam.SlackBuild b/academic/pysam/pysam.SlackBuild index 4f6d0a4fd4..e99e73f3f2 100644 --- a/academic/pysam/pysam.SlackBuild +++ b/academic/pysam/pysam.SlackBuild @@ -25,7 +25,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=pysam -VERSION=${VERSION:-0.23.0} +VERSION=${VERSION:-0.23.2} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} @@ -77,10 +77,7 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; -# pysam now at htslib-1.21; SBo-htslib is at 1.21: -# can use system htslib: -export HTSLIB_LIBRARY_DIR=/usr/lib$LIBDIRSUFFIX -export HTSLIB_INCLUDE_DIR=/usr/include +# pysam linked to htslib-1.21; SBo-htslib is at 1.22 #the source does not allow 'read' to 'other', which could cause a problem on reloading a Jupyter-notebook chmod 644 pysam.egg-info/* |