diff options
| author | David Spencer <baildon.research@googlemail.com> | 2015-11-18 22:52:43 +0000 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2016-01-17 09:40:16 +0700 |
| commit | 27a8de224cb1655929e432a481ce87b1c51adc5d (patch) | |
| tree | 84046e6aa7e9f1410b33d639a3c08905d2acba24 /academic | |
| parent | 25ccacc72f00d786c2c2fc70057b2a5029230c92 (diff) | |
academic/Kst: Patched for gsl-2.1.
Signed-off-by: David Spencer <baildon.research@googlemail.com>
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic')
| -rw-r--r-- | academic/Kst/Kst.SlackBuild | 3 | ||||
| -rw-r--r-- | academic/Kst/Kst_gsl2.patch | 53 |
2 files changed, 56 insertions, 0 deletions
diff --git a/academic/Kst/Kst.SlackBuild b/academic/Kst/Kst.SlackBuild index 0ab614f03d35..527bc6ba1b6e 100644 --- a/academic/Kst/Kst.SlackBuild +++ b/academic/Kst/Kst.SlackBuild @@ -45,6 +45,9 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; +# Fix build failure with gsl-2.1 (gsl API change) +patch -p1 < $CWD/Kst_gsl2.patch + sed -i "s/find_package\(PythonLibs REQUIRED\)/SET \(PythonLibs \"\/usr\/lib${LIBDIRSUFFIX}\/libpython2.7.so\"\)/" \ ./cmake/pyKst/CMakeLists.txt sed -i "s/\${NUMPY_VERSION_PATCH}/0/" ./cmake/modules/FindNumPy.cmake diff --git a/academic/Kst/Kst_gsl2.patch b/academic/Kst/Kst_gsl2.patch new file mode 100644 index 000000000000..1a7db24321bd --- /dev/null +++ b/academic/Kst/Kst_gsl2.patch @@ -0,0 +1,53 @@ +diff -u -r Kst-2.0.8/src/plugins/fits/non_linear.h Kst-2.0.8-patched/src/plugins/fits/non_linear.h +--- Kst-2.0.8/src/plugins/fits/non_linear.h 2014-02-13 09:41:44.000000000 +0000 ++++ Kst-2.0.8-patched/src/plugins/fits/non_linear.h 2015-11-18 22:28:40.761417846 +0000 +@@ -18,6 +18,7 @@ + #include <gsl/gsl_blas.h> + #include <gsl/gsl_multifit_nlin.h> + #include <gsl/gsl_statistics.h> ++#include <gsl/gsl_version.h> + #include "common.h" + + struct data { +@@ -177,7 +178,15 @@ + } + iIterations++; + } while( iStatus == GSL_CONTINUE && iIterations < MAX_NUM_ITERATIONS ); ++ ++#if GSL_MAJOR_VERSION >=2 ++ gsl_matrix *J=gsl_matrix_alloc(pSolver->fdf->n, pSolver->fdf->p); ++ gsl_multifit_fdfsolver_jac (pSolver, J); ++ gsl_multifit_covar( J, 0.0, pMatrixCovariance ); ++ gsl_matrix_free(J); ++#else + gsl_multifit_covar( pSolver->J, 0.0, pMatrixCovariance ); ++#endif + + // + // determine the fitted values... +diff -u -r Kst-2.0.8/src/plugins/fits/non_linear_weighted.h Kst-2.0.8-patched/src/plugins/fits/non_linear_weighted.h +--- Kst-2.0.8/src/plugins/fits/non_linear_weighted.h 2014-02-13 09:41:44.000000000 +0000 ++++ Kst-2.0.8-patched/src/plugins/fits/non_linear_weighted.h 2015-11-18 22:28:44.004399807 +0000 +@@ -18,6 +18,7 @@ + #include <gsl/gsl_blas.h> + #include <gsl/gsl_multifit_nlin.h> + #include <gsl/gsl_statistics.h> ++#include <gsl/gsl_version.h> + #include "common.h" + + struct data { +@@ -193,7 +194,14 @@ + } + while( iStatus == GSL_CONTINUE && iIterations < MAX_NUM_ITERATIONS ); + ++#if GSL_MAJOR_VERSION >=2 ++ gsl_matrix *J=gsl_matrix_alloc(pSolver->fdf->n, pSolver->fdf->p); ++ gsl_multifit_fdfsolver_jac (pSolver, J); ++ gsl_multifit_covar( J, 0.0, pMatrixCovariance ); ++ gsl_matrix_free(J); ++#else + gsl_multifit_covar( pSolver->J, 0.0, pMatrixCovariance ); ++#endif + + // + // determine the fitted values... |