academic/amd: Updated for version 2.4.6.

Signed-off-by: Kyle Guinn <elyk03@gmail.com>

1 files changed, 210 insertions, 0 deletions

diff --git a/academic/amd/patches/autotoolize.diff b/academic/amd/patches/autotoolize.diff
new file mode 100644
index 000000000000..a197808dbea3
--- /dev/null
+++ b/academic/amd/patches/autotoolize.diff
@@ -0,0 +1,210 @@
+diff --git a/Demo/Makefile.am b/Demo/Makefile.am
+new file mode 100644
+--- /dev/null
++++ b/Demo/Makefile.am
+@@ -0,0 +1,53 @@
++AM_CPPFLAGS = -I$(top_srcdir)/Include $(SUITESPARSECONFIG_CFLAGS)
++LDADD = $(top_builddir)/Source/libamd.la
++
++EXTRA_DIST = \
++	amd_demo.out \
++	amd_demo2.out \
++	amd_l_demo.out \
++	amd_simple.out \
++	amd_f77cross.out \
++	amd_f77demo.out \
++	amd_f77simple.out
++
++# Disable the .out implicit pattern rule.  Prevents GNU make from
++# adding bogus dependencies for the .out files listed above.
++%.out: %
++
++check_PROGRAMS = \
++	amd_demo \
++	amd_demo2 \
++	amd_l_demo \
++	amd_simple \
++	amd_f77cross \
++	amd_f77demo \
++	amd_f77simple
++
++amd_demo_SOURCES = amd_demo.c
++amd_demo2_SOURCES = amd_demo2.c
++amd_l_demo_SOURCES = amd_l_demo.c
++amd_simple_SOURCES = amd_simple.c
++
++check_LTLIBRARIES = libamd_f77wrapper.la
++libamd_f77wrapper_la_SOURCES = amd_f77wrapper.c
++libamd_f77wrapper_la_CPPFLAGS = $(AM_CPPFLAGS) -DDINT
++
++amd_f77cross_SOURCES = amd_f77cross.f
++amd_f77cross_LDADD = $(LDADD) $(top_builddir)/Source/libamdf77.la libamd_f77wrapper.la
++amd_f77demo_SOURCES = amd_f77demo.f
++amd_f77demo_LDADD = $(LDADD) $(top_builddir)/Source/libamdf77.la
++amd_f77simple_SOURCES = amd_f77simple.f
++amd_f77simple_LDADD = $(LDADD) $(top_builddir)/Source/libamdf77.la
++
++check-local: $(check_PROGRAMS) $(check_PROGRAMS:=.out)
++	@for i in $(check_PROGRAMS); do \
++		echo "Testing $$i"; \
++		./$$i$(EXEEXT) > my_$$i.out; \
++		if diff -u $(srcdir)/$$i.out my_$$i.out; then \
++			echo "Test $$i PASSED."; \
++		else \
++			echo "Test $$i FAILED."; \
++		fi; \
++	done
++
++CLEANFILES = my_*.out
+diff --git a/Doc/Makefile.am b/Doc/Makefile.am
+new file mode 100644
+--- /dev/null
++++ b/Doc/Makefile.am
+@@ -0,0 +1,27 @@
++EXTRA_DIST = ChangeLog License.txt lesser.txt
++
++dist_noinst_DATA = AMD_UserGuide.tex AMD_UserGuide.bib
++dist_pdf_DATA = AMD_UserGuide.pdf
++
++AMD_UserGuide.pdf AMD_UserGuide.aux: amd_h.tex
++.INTERMEDIATE: AMD_UserGuide.aux amd_h.tex
++
++%_h.tex: $(top_srcdir)/Include/%.h
++	echo '\begin{verbatim}' > $@
++	expand -8 $< >> $@
++	echo '\end{verbatim}' >> $@
++
++TEX = TEXINPUTS="$(srcdir):" pdflatex -interaction nonstopmode -file-line-error
++BIB = BIBINPUTS="$(srcdir):" bibtex
++%.pdf: %.tex %.bbl
++	$(TEX) $*
++	while grep -q "Rerun to get cross-references right" $*.log; do \
++		$(TEX) $*; \
++	done
++%.bbl: %.aux %.bib
++	$(BIB) $*
++%.aux: %.tex
++	$(TEX) $*
++
++CLEANFILES = *.aux *.bbl *.blg *.log *.toc *_h.tex
++MAINTAINERCLEANFILES = $(dist_pdf_DATA)
+diff --git a/Include/Makefile.am b/Include/Makefile.am
+new file mode 100644
+--- /dev/null
++++ b/Include/Makefile.am
+@@ -0,0 +1 @@
++pkginclude_HEADERS = amd.h amd_internal.h
+diff --git a/Makefile.am b/Makefile.am
+new file mode 100644
+--- /dev/null
++++ b/Makefile.am
+@@ -0,0 +1,4 @@
++SUBDIRS = Include Source Demo Doc
++EXTRA_DIST = README.txt
++
++pkgconfig_DATA = amd.pc
+diff --git a/Source/Makefile.am b/Source/Makefile.am
+new file mode 100644
+--- /dev/null
++++ b/Source/Makefile.am
+@@ -0,0 +1,33 @@
++AM_CPPFLAGS = -I$(top_srcdir)/Include $(SUITESPARSECONFIG_CFLAGS)
++
++AMDSRC = \
++	amd_1.c \
++	amd_2.c \
++	amd_aat.c \
++	amd_control.c \
++	amd_defaults.c \
++	amd_dump.c \
++	amd_info.c \
++	amd_order.c \
++	amd_postorder.c \
++	amd_post_tree.c \
++	amd_preprocess.c \
++	amd_valid.c
++
++lib_LTLIBRARIES = libamd.la libamdf77.la
++noinst_LTLIBRARIES = libamdi.la libamdl.la
++
++libamdi_la_SOURCES = $(AMDSRC)
++libamdi_la_LIBADD = $(SUITESPARSECONFIG_LIBS) -lm
++libamdi_la_CPPFLAGS = $(AM_CPPFLAGS) -DDINT
++
++libamdl_la_SOURCES = $(AMDSRC)
++libamdl_la_LIBADD = $(SUITESPARSECONFIG_LIBS) -lm
++libamdl_la_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG
++
++libamd_la_SOURCES =
++libamd_la_LIBADD = libamdl.la libamdi.la
++libamd_la_LDFLAGS = -no-undefined -release $(PACKAGE_VERSION)
++
++libamdf77_la_SOURCES = amd.f amdbar.f
++libamdf77_la_LDFLAGS = -no-undefined -release $(PACKAGE_VERSION)
+diff --git a/amd.pc.in b/amd.pc.in
+new file mode 100644
+--- /dev/null
++++ b/amd.pc.in
+@@ -0,0 +1,13 @@
++prefix=@prefix@
++exec_prefix=@exec_prefix@
++libdir=@libdir@
++includedir=@includedir@
++
++Name: @PACKAGE_NAME@
++Description: Approximate minimum degree ordering
++Version: @PACKAGE_VERSION@
++URL: @PACKAGE_URL@
++Requires.private: suitesparseconfig
++Libs: -L${libdir} -lamd
++Libs.private: -lm
++Cflags: -I${includedir}/amd
+diff --git a/configure.ac b/configure.ac
+new file mode 100644
+--- /dev/null
++++ b/configure.ac
+@@ -0,0 +1,44 @@
++#                                               -*- Autoconf -*-
++# Process this file with autoconf to produce a configure script.
++
++AC_PREREQ([2.69])
++AC_INIT([AMD],[2.4.6],[DrTimothyAldenDavis@gmail.com],[amd],[http://www.suitesparse.com/])
++AC_CONFIG_SRCDIR([Source/amd_order.c])
++AC_CONFIG_HEADERS([config.h])
++AM_INIT_AUTOMAKE([foreign])
++LT_INIT
++
++# Checks for programs.
++PKG_PROG_PKG_CONFIG
++AC_PROG_INSTALL
++AC_PROG_CC
++AC_PROG_F77
++
++AS_VAR_SET([LIBS_SAVED], [$LIBS])
++
++# Checks for libraries.
++AC_CHECK_LIB([m], [sqrt])
++
++PKG_CHECK_MODULES([SUITESPARSECONFIG], [suitesparseconfig])
++
++# Checks for header files.
++AC_CHECK_HEADERS([limits.h stddef.h stdlib.h])
++
++# Checks for typedefs, structures, and compiler characteristics.
++AC_TYPE_SIZE_T
++
++# Checks for library functions.
++AC_CHECK_FUNCS([sqrt])
++
++AS_VAR_SET([LIBS], [$LIBS_SAVED])
++
++PKG_INSTALLDIR
++AC_CONFIG_FILES([
++	amd.pc
++	Makefile
++	Demo/Makefile
++	Doc/Makefile
++	Include/Makefile
++	Source/Makefile
++])
++AC_OUTPUT