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New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies:
Assessing the Performance of PhyML 3.0. Guindon S., Dufayard J.F.,
Lefort V., Anisimova M., Hordijk W., Gascuel O. Systematic Biology,
59(3):307-21, 2010.

Bayesian estimation of divergence times from large sequence alignments.
Mol Biol Evol. 2010 Aug;27(8):1768-81. doi: 10.1093/molbev/msq060.
Epub 2010 Mar 1.