aboutsummaryrefslogtreecommitdiff
path: root/academic/ITK/ITK.SlackBuild
blob: afd0f0cc99342b917a12dd857c1739f4bbf497e8 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
#!/bin/bash

# SlackBuild script for ITK

# Copyright 2018-2021 Benjamin Trigona-Harany <slackbuilds@jaxartes.net>
# All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions are
# met:
#
# * Redistributions of source code must retain the above copyright
# notice, this list of conditions and the following disclaimer.
#
# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
# "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
# LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
# A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
# OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
# LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
# DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
# THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

cd $(dirname $0) ; CWD=$(pwd)

PRGNAM=ITK
SRCNAM=InsightToolkit
VERSION=${VERSION:-4.13.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}

if [ -z "$ARCH" ]; then
  case "$( uname -m )" in
    i?86) ARCH=i586 ;;
    arm*) ARCH=arm ;;
       *) ARCH=$( uname -m ) ;;
  esac
fi

# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
# the name of the created package would be, and then exit. This information
# could be useful to other scripts.
if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
  echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
  exit 0
fi

TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

if [ "$ARCH" = "i586" ]; then
  SLKCFLAGS="-O2 -march=i586 -mtune=i686"
  LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
  SLKCFLAGS="-O2 -march=i686 -mtune=i686"
  LIBDIRSUFFIX=""
elif [ "$ARCH" = "x86_64" ]; then
  SLKCFLAGS="-O2 -fPIC"
  LIBDIRSUFFIX="64"
else
  SLKCFLAGS="-O2"
  LIBDIRSUFFIX=""
fi

set -e

rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
rm -rf $SRCNAM-$VERSION
tar xvf $CWD/$SRCNAM-$VERSION.tar.xz
cd $SRCNAM-$VERSION
chown -R root:root .
find -L . \
 \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
  -o -perm 511 \) -exec chmod 755 {} \; -o \
 \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
  -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;

patch -p1 <<'endpatch'
--- InsightToolkit-4.13.2/Modules/ThirdParty/VNL/src/vxl/vcl/vcl_compiler.h.cp
+++ InsightToolkit-4.13.2/Modules/ThirdParty/VNL/src/vxl/vcl/vcl_compiler.h
@@ -96,6 +96,28 @@
 #   define VCL_GCC_81
 #  else
 #   define VCL_GCC_80
+#  endif
+# elif (__GNUC__==9)
+#  define VCL_GCC_9
+#  if (__GNUC_MINOR__ > 2 )
+#   define VCL_GCC_93
+#  elif (__GNUC_MINOR__ > 1 )
+#   define VCL_GCC_92
+#  elif (__GNUC_MINOR__ > 0 )
+#   define VCL_GCC_91
+#  else
+#   define VCL_GCC_90
+#  endif
+# elif (__GNUC__==10)
+#  define VCL_GCC_10
+#  if (__GNUC_MINOR__ > 2 )
+#   define VCL_GCC_103
+#  elif (__GNUC_MINOR__ > 1 )
+#   define VCL_GCC_102
+#  elif (__GNUC_MINOR__ > 0 )
+#   define VCL_GCC_101
+#  else
+#   define VCL_GCC_100
 #  endif
 # else
 #  error "Dunno about this gcc"
endpatch

sed -i "s/lib\b/lib${LIBDIRSUFFIX}/" CMakeLists.txt
sed -i "s|/opj_config.h|& \$\{CMAKE_CURRENT_BINARY_DIR\}/openjpeg_mangle.h|" \
    Modules/ThirdParty/GDCM/src/gdcm/Utilities/gdcmopenjpeg/src/lib/openjp2/CMakeLists.txt

mkdir -p build
cd build
  cmake \
    -DCMAKE_C_FLAGS="$SLKCFLAGS" \
    -DCMAKE_CXX_FLAGS="$SLKCFLAGS" \
    -DCMAKE_INSTALL_PREFIX=/usr \
    -DITK_FORBID_DOWNLOADS=ON \
    -DITK_WRAP_PYTHON=OFF \
    -DBUILD_SHARED_LIBS=ON \
    -DBUILD_EXAMPLES=OFF \
    -DITK_USE_SYSTEM_LIBRARIES=ON \
    -DITK_USE_SYSTEM_DCMTK=ON \
    -DITK_USE_SYSTEM_DOUBLECONVERSION=ON \
    -DITK_USE_SYSTEM_EXPAT=ON \
    -DITK_USE_SYSTEM_FFTW=ON \
    -DITK_USE_SYSTEM_HDF5=ON \
    -DITK_USE_SYSTEM_JPEG=ON \
    -DITK_USE_SYSTEM_PNG=ON \
    -DITK_USE_SYSTEM_TIFF=ON \
    -DITK_USE_SYSTEM_ZLIB=ON \
    -DCMAKE_BUILD_TYPE=Release ..
  make install DESTDIR=$PKG
cd ..

# remove pkg-config file for openjpeg since this overwrites system package for something that should be internal to ITK
rm -rf $PKG/usr/lib64/pkgconfig

find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
  | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true

mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
mv $PKG/usr/share/doc/$PRGNAM-$(echo $VERSION | cut -d "." -f 1,2)/* $PKG/usr/doc/$PRGNAM-$VERSION
rm -r $PKG/usr/share/doc
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild

mkdir $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc

cd $PKG
/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE