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2023-10-28academic/qucs-s: Updated for version 2.1.0.Johannes Schoepfer
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-10-21academic/cdo: Updated for version 2.3.0.ArTourter
Signed-off-by: ArTourter <artourter@gmail.com> Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-10-20academic/python3-scipy: Fix dep.Willy Sudiarto Raharjo
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-10-19academic/fet: Updated for version 6.9.7.R.S.Ananda Murthy
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-10-16academic/python3-scipy: Add OpenBLAS as dep.Willy Sudiarto Raharjo
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-10-16academic/python3-scipy: Add missing python3-mesonpy dependency.Andrew Clemons
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-10-14academic/ncbi-edirect: Updated for version 20.5.20231007.Petar Petrov
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-10-14academic/python3-scipy: Version bump to 1.11.3Jeremy Hansen
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-10-10academic/ViennaRNA: upgrade to version 2.6.4; edit READMEbrobr
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-10-07academic/ViennaRNA: Update script.brobr
Enable RNAxplorer, needs setting which blas is used to compile lapack(e), see README and ViennaRNA.SlackBuild Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-10-07academic/fet: Updated for version 6.9.6.R.S.Ananda Murthy
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-29academic/sage: Updated for 10.1cduston44
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/SU2: Add network warning to README.Andrew Clemons
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/python3-scipy: Correct emailJeremy Hansen
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/xsimd: Correct email and clean up SlackBuildJeremy Hansen
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/nco: Updated for version 5.1.8.ArTourter
Signed-off-by: ArTourter <artourter@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/gaiasky: Updated for version 3.5.3.Giancarlo Dessi
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/wise: Update script.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/seqkit: Updated for version 2.5.1.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/STAR:Upgrade to version 2.7.11abrobr
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/ViennaRNA: Upgrade to version 2.6.3brobr
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/samtools: Upgrade to version 1.18brobr
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/rpy2: Upgrade to version 3.5.14brobr
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/pysam: set to use internal htslibbrobr
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/bcftools: Upgrade to version 1.18brobr
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-23academic/fastqc: cleanup doinst.sh, info updatedbrobr
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-17academic/ncbi-edirect: Added (Entrez Direct cli utilities).Petar Petrov
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-17academic/g3data: Fix DOWNLOAD.Petar Petrov
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-17academic/RepeatMasker: Updated for version 4.1.5.Petar Petrov
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-17academic/jalview: Updated for version 2.11.2.7.Petar Petrov
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-17academic/IGV: Updated for version 2.16.2.Petar Petrov
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-17academic/fiji: Updated for version 20230801_1717.Petar Petrov
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-17academic/wehi-weasel: Updated for version 3.8.0.18.Petar Petrov
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-17academic/ugene: Updated for version 48.1.Petar Petrov
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-13academic/HMMER: Updated for version 3.4.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-13academic/iqtree: Updated for version 2.2.2.7.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-13academic/ncbi-blast+: Updated for version 2.14.1.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-13academic/meme-suite: Updated for version 5.5.4.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-13academic/Gblocks: Update script.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-11academic/cistrome-MACS: update source.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-11academic/topdraw: update source.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-11academic/aline: update source.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-11academic/treeviewx: update source.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-11academic/sim: Added (local similarity program).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-11academic/FastTree: Added (Infers approximately-ML phylogenetic).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-11academic/kalign: Added (multipelsquence alignment program).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-11games/wise: Added (Compare protein to DNA sequence).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-11academic/FigTree: Add (A graphical viewer of phylogenetic trees).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-09academic/cadabra2: Updated for version 2.4.4.Alexander Verbovetsky
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2023-09-09academic/WolframEngine: Updated for version 13.3.0.Alexander Verbovetsky
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>