diff options
Diffstat (limited to 'libraries/htslib')
| -rw-r--r-- | libraries/htslib/README | 11 | ||||
| -rw-r--r-- | libraries/htslib/htslib.SlackBuild | 4 | ||||
| -rw-r--r-- | libraries/htslib/htslib.info | 6 | ||||
| -rw-r--r-- | libraries/htslib/slack-desc | 8 |
4 files changed, 15 insertions, 14 deletions
diff --git a/libraries/htslib/README b/libraries/htslib/README index de684e902869..05556cf5bb6d 100644 --- a/libraries/htslib/README +++ b/libraries/htslib/README @@ -1,7 +1,8 @@ -Prior to the introduction of HTSlib, SAMtools and BCFtools were distributed -in a single samtools-0.1.x package. -This old version remains available from SBo as samtools-legacy +Prior to the introduction of HTSlib, SAMtools and BCFtools were distributed +in a single samtools-0.1.x package. This old version remains available from +SBo as samtools-legacy. -HTSlib has been distributed as a separate package to facilitate the writing +HTSlib has been distributed as a separate package to facilitate the writing of programs against the HTSlib API. HTSlib also provides the bgzip, htsfile, -and tabix utilities, so the installation of HTSlib provides these utilities as well. +and tabix utilities, so the installation of HTSlib provides these utilities +as well. diff --git a/libraries/htslib/htslib.SlackBuild b/libraries/htslib/htslib.SlackBuild index 230f89047bf7..b45a1bac0116 100644 --- a/libraries/htslib/htslib.SlackBuild +++ b/libraries/htslib/htslib.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for htslib -# Copyright 2018 rob van nues # All rights reserved. +# Copyright 2018-2020 Rob van Nues # All rights reserved. # # Redistribution and use of this script, with or without modification, is # permitted provided that the following conditions are met: @@ -22,7 +22,7 @@ # ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. PRGNAM=htslib -VERSION=${VERSION:-1.9} +VERSION=${VERSION:-1.10.2} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} diff --git a/libraries/htslib/htslib.info b/libraries/htslib/htslib.info index 5151ea72b53e..79a3d799d336 100644 --- a/libraries/htslib/htslib.info +++ b/libraries/htslib/htslib.info @@ -1,8 +1,8 @@ PRGNAM="htslib" -VERSION="1.9" +VERSION="1.10.2" HOMEPAGE="http://www.htslib.org" -DOWNLOAD="https://github.com/samtools/htslib/releases/download/1.9/htslib-1.9.tar.bz2" -MD5SUM="2ac92c9c3eef9986345ac69a05dd4d24" +DOWNLOAD="https://github.com/samtools/htslib/releases/download/1.10.2/htslib-1.10.2.tar.bz2" +MD5SUM="9b03764c4809388625ab0b6352b13c93" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="" diff --git a/libraries/htslib/slack-desc b/libraries/htslib/slack-desc index 5d7ac1f55607..c26f985a51e0 100644 --- a/libraries/htslib/slack-desc +++ b/libraries/htslib/slack-desc @@ -11,9 +11,9 @@ htslib: htslib: HTSlib is an implementation of a unified C library for accessing htslib: common file formats, such as SAM, CRAM and VCF, used for high- htslib: throughput sequencing data, and is the core library used by samtools -htslib: and bcftools. HTSlib only depends on zlib. It is known to be -htslib: compatible with gcc, g++ and clang. This is an independent package -htslib: to provide the HTSlib API for other programs. +htslib: and bcftools. It is known to be compatible with gcc, g++ and clang. +htslib: HTSlib also provides the bgzip, htsfile, and tabix utilities. +htslib: +htslib: Homepage: http://www.htslib.org htslib: -htslib: Home: http://www.htslib.org htslib: |