diff options
Diffstat (limited to 'academic')
| -rw-r--r-- | academic/PhyML/PhyML.SlackBuild | 35 | ||||
| -rw-r--r-- | academic/PhyML/PhyML.info | 6 |
2 files changed, 15 insertions, 26 deletions
diff --git a/academic/PhyML/PhyML.SlackBuild b/academic/PhyML/PhyML.SlackBuild index cab8490604d04..bddb063c007bf 100644 --- a/academic/PhyML/PhyML.SlackBuild +++ b/academic/PhyML/PhyML.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for PhyML -# Copyright 2011-2019 Petar Petrov slackalaxy@gmail.com +# Copyright 2011-2020 Petar Petrov slackalaxy@gmail.com # All rights reserved. # # Redistribution and use of this script, with or without modification, is @@ -25,11 +25,12 @@ # Thanks to Niels Horn for some handy modifications and corrections. PRGNAM=PhyML -SRCNAM=$(echo $PRGNAM | tr A-Z a-z) -VERSION=${VERSION:-3.3.20190321} +VERSION=${VERSION:-3.3.20190909} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} +SRCNAM=$(echo $PRGNAM | tr A-Z a-z) + if [ -z "$ARCH" ]; then case "$( uname -m )" in i?86) ARCH=i586 ;; @@ -86,12 +87,9 @@ find -L . \ --build=$ARCH-slackware-linux # Use our CFLAGS -sed -i "/^CFLAGS/s/=/+=/" src/Makefile -sed -i "/^CFLAGS/s/=/+=/" Makefile +sed -i "/^CFLAGS/s/=/+=/" Makefile src/Makefile -CFLAGS="$SLKCFLAGS" \ -CXXFLAGS="$SLKCFLAGS" \ -make +CFLAGS="$SLKCFLAGS" CXXFLAGS="$SLKCFLAGS" make make install DESTDIR=$PKG # This is PhyML MPI. If you do not want it, comment the lines below. Then you do @@ -108,12 +106,9 @@ make install DESTDIR=$PKG --build=$ARCH-slackware-linux # Use our CFLAGS -sed -i "/^CFLAGS/s/=/+=/" src/Makefile -sed -i "/^CFLAGS/s/=/+=/" Makefile +sed -i "/^CFLAGS/s/=/+=/" Makefile src/Makefile -CFLAGS="$SLKCFLAGS" \ -CXXFLAGS="$SLKCFLAGS" \ -make +CFLAGS="$SLKCFLAGS" CXXFLAGS="$SLKCFLAGS" make make install DESTDIR=$PKG # This is Phyrex @@ -129,12 +124,9 @@ make install DESTDIR=$PKG --build=$ARCH-slackware-linux # Use our CFLAGS -sed -i "/^CFLAGS/s/=/+=/" src/Makefile -sed -i "/^CFLAGS/s/=/+=/" Makefile +sed -i "/^CFLAGS/s/=/+=/" Makefile src/Makefile -CFLAGS="$SLKCFLAGS" \ -CXXFLAGS="$SLKCFLAGS" \ -make +CFLAGS="$SLKCFLAGS" CXXFLAGS="$SLKCFLAGS" make make install DESTDIR=$PKG # This is PhyTime @@ -150,12 +142,9 @@ make install DESTDIR=$PKG --build=$ARCH-slackware-linux # Use our CFLAGS -sed -i "/^CFLAGS/s/=/+=/" src/Makefile -sed -i "/^CFLAGS/s/=/+=/" Makefile +sed -i "/^CFLAGS/s/=/+=/" Makefile src/Makefile -CFLAGS="$SLKCFLAGS" \ -CXXFLAGS="$SLKCFLAGS" \ -make +CFLAGS="$SLKCFLAGS" CXXFLAGS="$SLKCFLAGS" make make install DESTDIR=$PKG find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \ diff --git a/academic/PhyML/PhyML.info b/academic/PhyML/PhyML.info index 14ae908fd7207..f44eaca3deecf 100644 --- a/academic/PhyML/PhyML.info +++ b/academic/PhyML/PhyML.info @@ -1,8 +1,8 @@ PRGNAM="PhyML" -VERSION="3.3.20190321" +VERSION="3.3.20190909" HOMEPAGE="https://github.com/stephaneguindon/phyml/" -DOWNLOAD="https://github.com/stephaneguindon/phyml/archive/v3.3.20190321/phyml-3.3.20190321.tar.gz" -MD5SUM="72d375be9c08ec34bedee126bfb141d9" +DOWNLOAD="https://github.com/stephaneguindon/phyml/archive/v3.3.20190909/phyml-3.3.20190909.tar.gz" +MD5SUM="35698ff61c1db57b238f5b2d2cc784b3" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="openmpi" |