diff options
Diffstat (limited to 'academic/vcftools/use-dpkg-buildflags.patch')
| -rw-r--r-- | academic/vcftools/use-dpkg-buildflags.patch | 40 |
1 files changed, 40 insertions, 0 deletions
diff --git a/academic/vcftools/use-dpkg-buildflags.patch b/academic/vcftools/use-dpkg-buildflags.patch new file mode 100644 index 0000000000000..3bd8521a3a8bf --- /dev/null +++ b/academic/vcftools/use-dpkg-buildflags.patch @@ -0,0 +1,40 @@ +Author: Andreas Tille <tille@debian.org> +Date: Sat, 12 May 2012 09:31:58 +0200 +Description: Enable propagation of hardening flags + +Index: vcftools_0.1.11/cpp/Makefile +=================================================================== +--- vcftools_0.1.11.orig/cpp/Makefile 2013-06-13 16:40:54.000000000 +0200 ++++ vcftools_0.1.11/cpp/Makefile 2013-06-27 19:54:45.000000000 +0200 +@@ -12,9 +12,9 @@ + VCFTOOLS_PCA = 0 + endif + # Compiler flags +-CFLAGS = -O2 -m64 ++CFLAGS += -O2 + #CFLAGS = -Wall -O2 -pg -m64 +-CPPFLAGS = -O2 -D_FILE_OFFSET_BITS=64 ++CPPFLAGS += -O2 -D_FILE_OFFSET_BITS=64 + #CPPFLAGS = -O2 -Wall -pg -D_FILE_OFFSET_BITS=64 + # Included libraries (zlib) + LIB = -lz +@@ -38,7 +38,7 @@ + endif + + vcftools: $(OBJS) +- $(CPP) $(CPPFLAGS) $(OBJS) -o vcftools $(LIB) ++ $(CPP) $(CPPFLAGS) $(OBJS) $(LDFLAGS) -o vcftools $(LIB) + ifdef BINDIR + cp $(CURDIR)/$@ $(BINDIR)/$@ + endif +@@ -50,8 +50,8 @@ + -include $(OBJS:.o=.d) + + %.o: %.cpp +- $(CPP) -c $(CPPFLAGS) $*.cpp -o $*.o +- $(CPP) -MM $(CPPFLAGS) $*.cpp > $*.d ++ $(CPP) -c $(CPPFLAGS) $(CFLAGS) $(LDFLAGS) $*.cpp -o $*.o ++ $(CPP) -MM $(CPPFLAGS) $(CFLAGS) $(LDFLAGS) $*.cpp > $*.d + + # remove compilation products + clean: |