diff options
Diffstat (limited to 'academic/umfpack/patches/autoconfiscate.diff')
| -rw-r--r-- | academic/umfpack/patches/autoconfiscate.diff | 1394 |
1 files changed, 1394 insertions, 0 deletions
diff --git a/academic/umfpack/patches/autoconfiscate.diff b/academic/umfpack/patches/autoconfiscate.diff new file mode 100644 index 000000000000..ccc8ee559628 --- /dev/null +++ b/academic/umfpack/patches/autoconfiscate.diff @@ -0,0 +1,1394 @@ +diff --git a/Demo/Makefile.am b/Demo/Makefile.am +new file mode 100644 +--- /dev/null ++++ b/Demo/Makefile.am +@@ -0,0 +1,162 @@ ++AM_CPPFLAGS = -I$(top_srcdir)/Include $(AMD_CFLAGS) $(SUITESPARSECONFIG_CFLAGS) ++ ++EXTRA_DIST = \ ++ umfpack_di_demo.out \ ++ umfpack_dl_demo.out \ ++ umfpack_zi_demo.out \ ++ umfpack_zl_demo.out \ ++ umf4.out \ ++ umf4hb.out \ ++ umf4hb64.out \ ++ umf4zhb.out ++ ++# Disable the .out implicit pattern rule. Prevents GNU make from ++# adding bogus dependencies for the .out files listed above. ++%.out: % ++ ++SIMPLE = \ ++ umfpack_simple ++ ++DEMO = \ ++ umfpack_di_demo \ ++ umfpack_dl_demo \ ++ umfpack_zi_demo \ ++ umfpack_zl_demo ++ ++READHB = \ ++ readhb \ ++ readhb_nozeros \ ++ readhb_size ++ ++UMF4 = \ ++ umf4 ++ ++UMF4HB = \ ++ umf4hb \ ++ umf4hb64 \ ++ umf4zhb ++ ++HB = \ ++ HB/arc130.rua \ ++ HB/can_24.psa \ ++ HB/fs_183_6.rua \ ++ HB/qc324.cua \ ++ HB/west0067.rua ++ ++umfpack_%_demo.c: umfpack_xx_demo.c umfpack_%_demo.sed ++ -sed -f umfpack_$*_demo.sed < umfpack_xx_demo.c > umfpack_$*_demo.c ++ ++dist_noinst_DATA = \ ++ umfpack_xx_demo.c \ ++ umfpack_di_demo.sed \ ++ umfpack_dl_demo.sed \ ++ umfpack_zi_demo.sed \ ++ umfpack_zl_demo.sed \ ++ $(HB) ++ ++dist_noinst_SCRIPTS = \ ++ dodefault \ ++ dospd ++ ++check_PROGRAMS = \ ++ $(SIMPLE) \ ++ $(DEMO) \ ++ $(READHB) \ ++ $(UMF4) \ ++ $(UMF4HB) ++ ++check_LTLIBRARIES = \ ++ libumf4_f77wrapper.la \ ++ libumf4_f77zwrapper.la \ ++ libumf4_f77wrapper64.la \ ++ libumf4_f77zwrapper64.la ++ ++umfpack_simple_SOURCES = umfpack_simple.c ++umfpack_simple_LDADD = $(top_builddir)/Source/libumfpack.la ++ ++umfpack_di_demo_SOURCES = umfpack_di_demo.c ++umfpack_di_demo_LDADD = $(top_builddir)/Source/libumfpack.la ++ ++umfpack_dl_demo_SOURCES = umfpack_dl_demo.c ++umfpack_dl_demo_LDADD = $(top_builddir)/Source/libumfpack.la ++ ++umfpack_zi_demo_SOURCES = umfpack_zi_demo.c ++umfpack_zi_demo_LDADD = $(top_builddir)/Source/libumfpack.la ++ ++umfpack_zl_demo_SOURCES = umfpack_zl_demo.c ++umfpack_zl_demo_LDADD = $(top_builddir)/Source/libumfpack.la ++ ++readhb_SOURCES = readhb.f ++ ++readhb_nozeros_SOURCES = readhb_nozeros.f ++ ++readhb_size_SOURCES = readhb_size.f ++ ++umf4_SOURCES = umf4.c ++umf4_LDADD = $(top_builddir)/Source/libumfpack.la $(AMD_LIBS) ++ ++umf4hb_SOURCES = umf4hb.f ++umf4hb_LDADD = libumf4_f77wrapper.la ++ ++umf4zhb_SOURCES = umf4zhb.f ++umf4zhb_LDADD = libumf4_f77zwrapper.la ++ ++umf4hb64_SOURCES = umf4hb64.f ++umf4hb64_LDADD = libumf4_f77wrapper64.la ++ ++libumf4_f77wrapper_la_SOURCES = umf4_f77wrapper.c ++libumf4_f77wrapper_la_LIBADD = $(top_builddir)/Source/libumfpack.la ++libumf4_f77wrapper_la_CPPFLAGS = $(AM_CPPFLAGS) ++ ++libumf4_f77zwrapper_la_SOURCES = umf4_f77zwrapper.c ++libumf4_f77zwrapper_la_LIBADD = $(top_builddir)/Source/libumfpack.la ++libumf4_f77zwrapper_la_CPPFLAGS = $(AM_CPPFLAGS) ++ ++libumf4_f77wrapper64_la_SOURCES = umf4_f77wrapper.c ++libumf4_f77wrapper64_la_LIBADD = $(top_builddir)/Source/libumfpack.la ++libumf4_f77wrapper64_la_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG ++ ++libumf4_f77zwrapper64_la_SOURCES = umf4_f77zwrapper.c ++libumf4_f77zwrapper64_la_LIBADD = $(top_builddir)/Source/libumfpack.la ++libumf4_f77zwrapper64_la_CPPFLAGS = $(AM_CPPFLAGS) -DZLONG ++ ++check-local: $(SIMPLE) $(DEMO) $(DEMO:=.out) $(READHB) $(HB) $(UMF4) $(UMF4HB) $(UMF4HB:=.out) ++ ./umfpack_simple ++ ./umfpack_di_demo > my_umfpack_di_demo.out ++ -diff -u $(srcdir)/umfpack_di_demo.out my_umfpack_di_demo.out ++ ./umfpack_dl_demo > my_umfpack_dl_demo.out ++ -diff -u $(srcdir)/umfpack_dl_demo.out my_umfpack_dl_demo.out ++ ./umfpack_zi_demo > my_umfpack_zi_demo.out ++ -diff -u $(srcdir)/umfpack_zi_demo.out my_umfpack_zi_demo.out ++ ./umfpack_zl_demo > my_umfpack_zl_demo.out ++ -diff -u $(srcdir)/umfpack_zl_demo.out my_umfpack_zl_demo.out ++ -$(MKDIR_P) tmp ++ -./readhb_nozeros < $(srcdir)/HB/can_24.psa > tmp/A ++ -./readhb_size < $(srcdir)/HB/can_24.psa > tmp/Asize ++ -./umf4 ++ -./readhb_nozeros < $(srcdir)/HB/west0067.rua > tmp/A ++ -./readhb_size < $(srcdir)/HB/west0067.rua > tmp/Asize ++ -./umf4 ++ -./readhb_nozeros < $(srcdir)/HB/fs_183_6.rua > tmp/A ++ -./readhb_size < $(srcdir)/HB/fs_183_6.rua > tmp/Asize ++ -./umf4 ++ -./readhb < $(srcdir)/HB/fs_183_6.rua > tmp/A ++ -./readhb_size < $(srcdir)/HB/fs_183_6.rua > tmp/Asize ++ -./umf4 ++ -./readhb < $(srcdir)/HB/arc130.rua > tmp/A ++ -./readhb_size < $(srcdir)/HB/arc130.rua > tmp/Asize ++ -./umf4 ++ -./readhb_nozeros < $(srcdir)/HB/arc130.rua > tmp/A ++ -./readhb_size < $(srcdir)/HB/arc130.rua > tmp/Asize ++ -./umf4 ++ -./readhb_nozeros < $(srcdir)/HB/arc130.rua > tmp/A ++ -./readhb_size < $(srcdir)/HB/arc130.rua > tmp/Asize ++ -./umf4 a 1e-6 ++ -./umf4hb < $(srcdir)/HB/west0067.rua > my_umf4hb.out ++ -diff -u $(srcdir)/umf4hb.out my_umf4hb.out ++ -./umf4zhb < $(srcdir)/HB/qc324.cua > my_umf4zhb.out ++ -diff -u $(srcdir)/umf4zhb.out my_umf4zhb.out ++ -./umf4hb64 < $(srcdir)/HB/west0067.rua > my_umf4hb64.out ++ -diff -u $(srcdir)/umf4hb64.out my_umf4hb64.out ++ ++CLEANFILES = my_*.out *.umf tmp/* tmp +diff --git a/Doc/Makefile.am b/Doc/Makefile.am +new file mode 100644 +--- /dev/null ++++ b/Doc/Makefile.am +@@ -0,0 +1,101 @@ ++EXTRA_DIST = \ ++ ChangeLog \ ++ License.txt \ ++ gpl.txt ++ ++dist_noinst_DATA = \ ++ UMFPACK_QuickStart.tex \ ++ UserGuide.bib \ ++ UserGuide.sed1 \ ++ UserGuide.sed2 \ ++ UMFPACK_UserGuide.stex ++ ++dist_pdf_DATA = \ ++ UMFPACK_QuickStart.pdf \ ++ UMFPACK_UserGuide.pdf ++ ++# Unlike UserGuide.sed1, use \input{filename.tex} to insert the source code ++# which we will construct below. Also remove the \begin{verbatim} and ++# \end{verbatim} on the adjacent lines and add them to filename.tex. ++define sed1 = ++sed -e ':more;$$!N;s/\n/&/2;t enough;$$!b more;:enough;/^\\begin{verbatim}\nINCLUDE umfpack\(.*\)\.\([ch]\) via sed\n\\end{verbatim}$$/s//\\input{\1_\2.tex}/;P;D' $< > $@ ++endef ++ ++# UserGuide.sed2 currently strips out C-style comments. In some cases it ++# strips out too much due to formatting; we'll leave that for upstream to fix. ++define sed2 = ++echo '\begin{verbatim}' > $@ ++sed -e '/[/][*]/d' -e '/[*][/]/d' < $< | expand -8 >> $@ ++echo '\end{verbatim}' >> $@ ++endef ++ ++UMFPACK_UserGuide.tex: $(srcdir)/UMFPACK_UserGuide.stex ++ $(sed1) ++ ++_simple_c.tex: $(top_srcdir)/Demo/umfpack_simple.c ++ $(sed2) ++%_h.tex: $(top_srcdir)/Include/umfpack%.h ++ $(sed2) ++ ++SRC = \ ++ _simple_c.tex \ ++ _col_to_triplet_h.tex \ ++ _defaults_h.tex \ ++ _free_numeric_h.tex \ ++ _free_symbolic_h.tex \ ++ _get_determinant_h.tex \ ++ _get_lunz_h.tex \ ++ _get_numeric_h.tex \ ++ _get_symbolic_h.tex \ ++ _load_numeric_h.tex \ ++ _load_symbolic_h.tex \ ++ _numeric_h.tex \ ++ _qsymbolic_h.tex \ ++ _report_control_h.tex \ ++ _report_info_h.tex \ ++ _report_matrix_h.tex \ ++ _report_numeric_h.tex \ ++ _report_perm_h.tex \ ++ _report_status_h.tex \ ++ _report_symbolic_h.tex \ ++ _report_triplet_h.tex \ ++ _report_vector_h.tex \ ++ _save_numeric_h.tex \ ++ _save_symbolic_h.tex \ ++ _scale_h.tex \ ++ _solve_h.tex \ ++ _symbolic_h.tex \ ++ _tictoc_h.tex \ ++ _timer_h.tex \ ++ _transpose_h.tex \ ++ _triplet_to_col_h.tex \ ++ _wsolve_h.tex ++ ++.INTERMEDIATE: UMFPACK_UserGuide.tex $(SRC) ++UMFPACK_UserGuide.tex: $(SRC) ++ ++.INTERMEDIATE: UMFPACK_UserGuide.bib ++UMFPACK_UserGuide.bib: UserGuide.bib ++ $(LN_S) -f $< $@ ++ ++TEX = TEXINPUTS="$(srcdir):" pdflatex -interaction nonstopmode -file-line-error ++BIB = BIBINPUTS="$(srcdir):" bibtex ++%.pdf: %.tex %.bbl ++ $(TEX) $* ++ while grep -q "Rerun to get cross-references right" $*.log; do \ ++ $(TEX) $*; \ ++ done ++%.bbl: %.aux %.bib ++ $(BIB) $* ++%.aux: %.tex ++ $(TEX) $* ++ ++# QuickStart does not include a bibliography, so the above rule won't work. ++UMFPACK_QuickStart.pdf: %.pdf: %.tex ++ $(TEX) $* ++ while grep -q "Rerun to get cross-references right" $*.log; do \ ++ $(TEX) $*; \ ++ done ++ ++CLEANFILES = *.aux *.bbl *.blg *.log *.toc UMFPACK_UserGuide.tex ++MAINTAINERCLEANFILES = $(dist_pdf_DATA) +diff --git a/Include/Makefile.am b/Include/Makefile.am +new file mode 100644 +--- /dev/null ++++ b/Include/Makefile.am +@@ -0,0 +1,34 @@ ++pkginclude_HEADERS = \ ++ umfpack.h \ ++ umfpack_col_to_triplet.h \ ++ umfpack_defaults.h \ ++ umfpack_free_numeric.h \ ++ umfpack_free_symbolic.h \ ++ umfpack_get_determinant.h \ ++ umfpack_get_lunz.h \ ++ umfpack_get_numeric.h \ ++ umfpack_get_symbolic.h \ ++ umfpack_global.h \ ++ umfpack_load_numeric.h \ ++ umfpack_load_symbolic.h \ ++ umfpack_numeric.h \ ++ umfpack_qsymbolic.h \ ++ umfpack_report_control.h \ ++ umfpack_report_info.h \ ++ umfpack_report_matrix.h \ ++ umfpack_report_numeric.h \ ++ umfpack_report_perm.h \ ++ umfpack_report_status.h \ ++ umfpack_report_symbolic.h \ ++ umfpack_report_triplet.h \ ++ umfpack_report_vector.h \ ++ umfpack_save_numeric.h \ ++ umfpack_save_symbolic.h \ ++ umfpack_scale.h \ ++ umfpack_solve.h \ ++ umfpack_symbolic.h \ ++ umfpack_tictoc.h \ ++ umfpack_timer.h \ ++ umfpack_transpose.h \ ++ umfpack_triplet_to_col.h \ ++ umfpack_wsolve.h +diff --git a/Makefile.am b/Makefile.am +new file mode 100644 +--- /dev/null ++++ b/Makefile.am +@@ -0,0 +1,9 @@ ++ACLOCAL_AMFLAGS = -I m4 ++ ++SUBDIRS = Include Source Demo Tcov Doc ++EXTRA_DIST = README.txt ++ ++pkgconfig_DATA = umfpack.pc ++ ++CODE_COVERAGE_BRANCH_COVERAGE = 1 ++@CODE_COVERAGE_RULES@ +diff --git a/Source/Makefile.am b/Source/Makefile.am +new file mode 100644 +--- /dev/null ++++ b/Source/Makefile.am +@@ -0,0 +1,323 @@ ++AM_CPPFLAGS = -I$(top_srcdir)/Include $(CHOLMOD_CFLAGS) $(AMD_CFLAGS) $(SUITESPARSECONFIG_CFLAGS) $(CODE_COVERAGE_CPPFLAGS) ++AM_CFLAGS = $(CODE_COVERAGE_CFLAGS) ++ ++if CODE_COVERAGE_ENABLED ++AM_CPPFLAGS += -DTESTING ++endif ++ ++# non-user-callable umf_*.[ch] files: ++UMF = \ ++ umf_assemble.c \ ++ umf_blas3_update.c \ ++ umf_build_tuples.c \ ++ umf_create_element.c \ ++ umf_dump.c \ ++ umf_extend_front.c \ ++ umf_garbage_collection.c \ ++ umf_get_memory.c \ ++ umf_grow_front.c \ ++ umf_init_front.c \ ++ umf_kernel.c \ ++ umf_kernel_init.c \ ++ umf_kernel_wrapup.c \ ++ umf_local_search.c \ ++ umf_lsolve.c \ ++ umf_ltsolve.c \ ++ umf_mem_alloc_element.c \ ++ umf_mem_alloc_head_block.c \ ++ umf_mem_alloc_tail_block.c \ ++ umf_mem_free_tail_block.c \ ++ umf_mem_init_memoryspace.c \ ++ umf_report_vector.c \ ++ umf_row_search.c \ ++ umf_scale.c \ ++ umf_scale_column.c \ ++ umf_set_stats.c \ ++ umf_solve.c \ ++ umf_start_front.c \ ++ umf_store_lu.c \ ++ umf_symbolic_usage.c \ ++ umf_transpose.c \ ++ umf_triplet.c \ ++ umf_tuple_lengths.c \ ++ umf_usolve.c \ ++ umf_utsolve.c \ ++ umf_valid_numeric.c \ ++ umf_valid_symbolic.c ++ ++# non-user-callable umf_*.[ch] files ++# int/SuiteSparse_long versions only (no real/complex): ++UMFINT = \ ++ umf_analyze.c \ ++ umf_apply_order.c \ ++ umf_cholmod.c \ ++ umf_colamd.c \ ++ umf_free.c \ ++ umf_fsize.c \ ++ umf_is_permutation.c \ ++ umf_malloc.c \ ++ umf_realloc.c \ ++ umf_report_perm.c \ ++ umf_singletons.c ++ ++# user-callable umfpack_*.c files ++# (int/SuiteSparse_long and real/complex): ++UMFPACK = \ ++ umfpack_col_to_triplet.c \ ++ umfpack_defaults.c \ ++ umfpack_free_numeric.c \ ++ umfpack_free_symbolic.c \ ++ umfpack_get_determinant.c \ ++ umfpack_get_lunz.c \ ++ umfpack_get_numeric.c \ ++ umfpack_get_symbolic.c \ ++ umfpack_load_numeric.c \ ++ umfpack_load_symbolic.c \ ++ umfpack_numeric.c \ ++ umfpack_qsymbolic.c \ ++ umfpack_report_control.c \ ++ umfpack_report_info.c \ ++ umfpack_report_matrix.c \ ++ umfpack_report_numeric.c \ ++ umfpack_report_perm.c \ ++ umfpack_report_status.c \ ++ umfpack_report_symbolic.c \ ++ umfpack_report_triplet.c \ ++ umfpack_report_vector.c \ ++ umfpack_save_numeric.c \ ++ umfpack_save_symbolic.c \ ++ umfpack_scale.c \ ++ umfpack_solve.c \ ++ umfpack_symbolic.c \ ++ umfpack_transpose.c \ ++ umfpack_triplet_to_col.c ++ ++# user-callable umfpack_*.c files ++# only one version for int/SuiteSparse_long, real/complex: ++GENERIC = \ ++ umfpack_timer.c \ ++ umfpack_tictoc.c \ ++ umfpack_global.c ++ ++noinst_HEADERS = \ ++ cholmod_blas.h \ ++ umf_config.h \ ++ umf_internal.h \ ++ umf_version.h \ ++ $(UMF:.c=.h) \ ++ $(UMFINT:.c=.h) ++ ++noinst_LTLIBRARIES = \ ++ libumf_i.la \ ++ libumf_l.la \ ++ libumf_di_hsolve.la \ ++ libumf_di_triplet_map_x.la \ ++ libumf_di_triplet_map_nox.la \ ++ libumf_di_triplet_nomap_x.la \ ++ libumf_di_assemble_fixq.la \ ++ libumf_di_store_lu_drop.la \ ++ libumf_di.la \ ++ libumfpack_di_wsolve.la \ ++ libumfpack_di.la \ ++ libumf_dl_hsolve.la \ ++ libumf_dl_triplet_map_x.la \ ++ libumf_dl_triplet_map_nox.la \ ++ libumf_dl_triplet_nomap_x.la \ ++ libumf_dl_assemble_fixq.la \ ++ libumf_dl_store_lu_drop.la \ ++ libumf_dl.la \ ++ libumfpack_dl_wsolve.la \ ++ libumfpack_dl.la \ ++ libumf_zi_hsolve.la \ ++ libumf_zi_triplet_map_x.la \ ++ libumf_zi_triplet_map_nox.la \ ++ libumf_zi_triplet_nomap_x.la \ ++ libumf_zi_assemble_fixq.la \ ++ libumf_zi_store_lu_drop.la \ ++ libumf_zi.la \ ++ libumfpack_zi_wsolve.la \ ++ libumfpack_zi.la \ ++ libumf_zl_hsolve.la \ ++ libumf_zl_triplet_map_x.la \ ++ libumf_zl_triplet_map_nox.la \ ++ libumf_zl_triplet_nomap_x.la \ ++ libumf_zl_assemble_fixq.la \ ++ libumf_zl_store_lu_drop.la \ ++ libumf_zl.la \ ++ libumfpack_zl_wsolve.la \ ++ libumfpack_zl.la ++ ++# compile each int and SuiteSparse_long routine (with no real/complex version) ++libumf_i_la_SOURCES = $(UMFINT) ++libumf_i_la_CPPFLAGS = $(AM_CPPFLAGS) -DDINT ++ ++libumf_l_la_SOURCES = $(UMFINT) ++libumf_l_la_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG ++ ++if CHOLMOD ++libumf_i_la_LIBADD = $(CHOLMOD_LIBS) ++libumf_l_la_LIBADD = $(CHOLMOD_LIBS) ++else ++libumf_i_la_CPPFLAGS += -DNCHOLMOD ++libumf_l_la_CPPFLAGS += -DNCHOLMOD ++endif ++ ++# compile each routine in the DI version ++libumf_di_hsolve_la_SOURCES = umf_ltsolve.c umf_utsolve.c ++libumf_di_hsolve_la_CPPFLAGS = $(AM_CPPFLAGS) -DDINT -DCONJUGATE_SOLVE ++ ++libumf_di_triplet_map_x_la_SOURCES = umf_triplet.c ++libumf_di_triplet_map_x_la_CPPFLAGS = $(AM_CPPFLAGS) -DDINT -DDO_MAP -DDO_VALUES ++ ++libumf_di_triplet_map_nox_la_SOURCES = umf_triplet.c ++libumf_di_triplet_map_nox_la_CPPFLAGS = $(AM_CPPFLAGS) -DDINT -DDO_MAP ++ ++libumf_di_triplet_nomap_x_la_SOURCES = umf_triplet.c ++libumf_di_triplet_nomap_x_la_CPPFLAGS = $(AM_CPPFLAGS) -DDINT -DDO_VALUES ++ ++libumf_di_assemble_fixq_la_SOURCES = umf_assemble.c ++libumf_di_assemble_fixq_la_CPPFLAGS = $(AM_CPPFLAGS) -DDINT -DFIXQ ++ ++libumf_di_store_lu_drop_la_SOURCES = umf_store_lu.c ++libumf_di_store_lu_drop_la_CPPFLAGS = $(AM_CPPFLAGS) -DDINT -DDROP ++ ++libumf_di_la_SOURCES = $(UMF) ++libumf_di_la_CPPFLAGS = $(AM_CPPFLAGS) -DDINT ++libumf_di_la_LIBADD = \ ++ libumf_di_hsolve.la \ ++ libumf_di_triplet_map_x.la \ ++ libumf_di_triplet_map_nox.la \ ++ libumf_di_triplet_nomap_x.la \ ++ libumf_di_assemble_fixq.la \ ++ libumf_di_store_lu_drop.la ++ ++libumfpack_di_wsolve_la_SOURCES = umfpack_solve.c ++libumfpack_di_wsolve_la_CPPFLAGS = $(AM_CPPFLAGS) -DDINT -DWSOLVE ++ ++libumfpack_di_la_SOURCES = $(UMFPACK) ++libumfpack_di_la_CPPFLAGS = $(AM_CPPFLAGS) -DDINT ++libumfpack_di_la_LIBADD = \ ++ libumfpack_di_wsolve.la ++ ++# compile each routine in the DL version ++libumf_dl_hsolve_la_SOURCES = umf_ltsolve.c umf_utsolve.c ++libumf_dl_hsolve_la_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG -DCONJUGATE_SOLVE ++ ++libumf_dl_triplet_map_x_la_SOURCES = umf_triplet.c ++libumf_dl_triplet_map_x_la_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG -DDO_MAP -DDO_VALUES ++ ++libumf_dl_triplet_map_nox_la_SOURCES = umf_triplet.c ++libumf_dl_triplet_map_nox_la_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG -DDO_MAP ++ ++libumf_dl_triplet_nomap_x_la_SOURCES = umf_triplet.c ++libumf_dl_triplet_nomap_x_la_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG -DDO_VALUES ++ ++libumf_dl_assemble_fixq_la_SOURCES = umf_assemble.c ++libumf_dl_assemble_fixq_la_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG -DFIXQ ++ ++libumf_dl_store_lu_drop_la_SOURCES = umf_store_lu.c ++libumf_dl_store_lu_drop_la_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG -DDROP ++ ++libumf_dl_la_SOURCES = $(UMF) ++libumf_dl_la_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG ++libumf_dl_la_LIBADD = \ ++ libumf_dl_hsolve.la \ ++ libumf_dl_triplet_map_x.la \ ++ libumf_dl_triplet_map_nox.la \ ++ libumf_dl_triplet_nomap_x.la \ ++ libumf_dl_assemble_fixq.la \ ++ libumf_dl_store_lu_drop.la ++ ++libumfpack_dl_wsolve_la_SOURCES = umfpack_solve.c ++libumfpack_dl_wsolve_la_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG -DWSOLVE ++ ++libumfpack_dl_la_SOURCES = $(UMFPACK) ++libumfpack_dl_la_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG ++libumfpack_dl_la_LIBADD = \ ++ libumfpack_dl_wsolve.la ++ ++# compile each routine in the ZI version ++libumf_zi_hsolve_la_SOURCES = umf_ltsolve.c umf_utsolve.c ++libumf_zi_hsolve_la_CPPFLAGS = $(AM_CPPFLAGS) -DZINT -DCONJUGATE_SOLVE ++ ++libumf_zi_triplet_map_x_la_SOURCES = umf_triplet.c ++libumf_zi_triplet_map_x_la_CPPFLAGS = $(AM_CPPFLAGS) -DZINT -DDO_MAP -DDO_VALUES ++ ++libumf_zi_triplet_map_nox_la_SOURCES = umf_triplet.c ++libumf_zi_triplet_map_nox_la_CPPFLAGS = $(AM_CPPFLAGS) -DZINT -DDO_MAP ++ ++libumf_zi_triplet_nomap_x_la_SOURCES = umf_triplet.c ++libumf_zi_triplet_nomap_x_la_CPPFLAGS = $(AM_CPPFLAGS) -DZINT -DDO_VALUES ++ ++libumf_zi_assemble_fixq_la_SOURCES = umf_assemble.c ++libumf_zi_assemble_fixq_la_CPPFLAGS = $(AM_CPPFLAGS) -DZINT -DFIXQ ++ ++libumf_zi_store_lu_drop_la_SOURCES = umf_store_lu.c ++libumf_zi_store_lu_drop_la_CPPFLAGS = $(AM_CPPFLAGS) -DZINT -DDROP ++ ++libumf_zi_la_SOURCES = $(UMF) ++libumf_zi_la_CPPFLAGS = $(AM_CPPFLAGS) -DZINT ++libumf_zi_la_LIBADD = \ ++ libumf_zi_hsolve.la \ ++ libumf_zi_triplet_map_x.la \ ++ libumf_zi_triplet_map_nox.la \ ++ libumf_zi_triplet_nomap_x.la \ ++ libumf_zi_assemble_fixq.la \ ++ libumf_zi_store_lu_drop.la ++ ++libumfpack_zi_wsolve_la_SOURCES = umfpack_solve.c ++libumfpack_zi_wsolve_la_CPPFLAGS = $(AM_CPPFLAGS) -DZINT -DWSOLVE ++ ++libumfpack_zi_la_SOURCES = $(UMFPACK) ++libumfpack_zi_la_CPPFLAGS = $(AM_CPPFLAGS) -DZINT ++libumfpack_zi_la_LIBADD = \ ++ libumfpack_zi_wsolve.la ++ ++# compile each routine in the ZL version ++libumf_zl_hsolve_la_SOURCES = umf_ltsolve.c umf_utsolve.c ++libumf_zl_hsolve_la_CPPFLAGS = $(AM_CPPFLAGS) -DZLONG -DCONJUGATE_SOLVE ++ ++libumf_zl_triplet_map_x_la_SOURCES = umf_triplet.c ++libumf_zl_triplet_map_x_la_CPPFLAGS = $(AM_CPPFLAGS) -DZLONG -DDO_MAP -DDO_VALUES ++ ++libumf_zl_triplet_map_nox_la_SOURCES = umf_triplet.c ++libumf_zl_triplet_map_nox_la_CPPFLAGS = $(AM_CPPFLAGS) -DZLONG -DDO_MAP ++ ++libumf_zl_triplet_nomap_x_la_SOURCES = umf_triplet.c ++libumf_zl_triplet_nomap_x_la_CPPFLAGS = $(AM_CPPFLAGS) -DZLONG -DDO_VALUES ++ ++libumf_zl_assemble_fixq_la_SOURCES = umf_assemble.c ++libumf_zl_assemble_fixq_la_CPPFLAGS = $(AM_CPPFLAGS) -DZLONG -DFIXQ ++ ++libumf_zl_store_lu_drop_la_SOURCES = umf_store_lu.c ++libumf_zl_store_lu_drop_la_CPPFLAGS = $(AM_CPPFLAGS) -DZLONG -DDROP ++ ++libumf_zl_la_SOURCES = $(UMF) ++libumf_zl_la_CPPFLAGS = $(AM_CPPFLAGS) -DZLONG ++libumf_zl_la_LIBADD = \ ++ libumf_zl_hsolve.la \ ++ libumf_zl_triplet_map_x.la \ ++ libumf_zl_triplet_map_nox.la \ ++ libumf_zl_triplet_nomap_x.la \ ++ libumf_zl_assemble_fixq.la \ ++ libumf_zl_store_lu_drop.la ++ ++libumfpack_zl_wsolve_la_SOURCES = umfpack_solve.c ++libumfpack_zl_wsolve_la_CPPFLAGS = $(AM_CPPFLAGS) -DZLONG -DWSOLVE ++ ++libumfpack_zl_la_SOURCES = $(UMFPACK) ++libumfpack_zl_la_CPPFLAGS = $(AM_CPPFLAGS) -DZLONG ++libumfpack_zl_la_LIBADD = \ ++ libumfpack_zl_wsolve.la ++ ++lib_LTLIBRARIES = libumfpack.la ++libumfpack_la_SOURCES = $(GENERIC) ++libumfpack_la_LIBADD = \ ++ libumf_i.la \ ++ libumf_l.la \ ++ libumf_di.la libumfpack_di.la \ ++ libumf_dl.la libumfpack_dl.la \ ++ libumf_zi.la libumfpack_zi.la \ ++ libumf_zl.la libumfpack_zl.la \ ++ $(AMD_LIBS) $(SUITESPARSECONFIG_LIBS) $(BLAS_LIBS) -lm $(CODE_COVERAGE_LIBS) ++libumfpack_la_LDFLAGS = -no-undefined -release $(PACKAGE_VERSION) +diff --git a/Tcov/Makefile.am b/Tcov/Makefile.am +new file mode 100644 +--- /dev/null ++++ b/Tcov/Makefile.am +@@ -0,0 +1,83 @@ ++AM_CPPFLAGS = -I$(top_srcdir)/Include -I$(top_srcdir)/Source $(AMD_CFLAGS) $(SUITESPARSECONFIG_CFLAGS) ++ ++EXTRA_DIST = \ ++ README.txt ++ ++dist_noinst_DATA = \ ++ badnum.umf \ ++ badnum2.umf \ ++ badsym.umf \ ++ badsym2.umf \ ++ TestMat/S_d2q06c \ ++ TestMat/adlittle \ ++ TestMat/arc130 \ ++ TestMat/cage3 \ ++ TestMat/d_dyn \ ++ TestMat/galenet \ ++ TestMat/matrix1 \ ++ TestMat/matrix2 \ ++ TestMat/matrix3 \ ++ TestMat/matrix4 \ ++ TestMat/matrix5 \ ++ TestMat/matrix6 \ ++ TestMat/matrix7 \ ++ TestMat/matrix8 \ ++ TestMat/matrix10 \ ++ TestMat/matrix11 \ ++ TestMat/matrix12 \ ++ TestMat/matrix13 \ ++ TestMat/matrix14 \ ++ TestMat/matrix15 \ ++ TestMat/matrix16 \ ++ TestMat/matrix17 \ ++ TestMat/matrix18 \ ++ TestMat/matrix19 \ ++ TestMat/matrix20 \ ++ TestMat/matrix21 \ ++ TestMat/matrix22 \ ++ TestMat/matrix23 \ ++ TestMat/matrix24 \ ++ TestMat/matrix25 \ ++ TestMat/matrix26 \ ++ TestMat/matrix27 \ ++ TestMat/matrix28 \ ++ TestMat/matrix29 \ ++ TestMat/matrix30 \ ++ TestMat/nug07 \ ++ TestMat/shl0 ++ ++if CODE_COVERAGE_ENABLED ++# TODO: Support the various flag combinations in the Make.# files. ++# Probably requires copying them to Source/Makefile.am and rebuilding all. ++AM_CPPFLAGS += -DTESTING ++ ++check_PROGRAMS = \ ++ ut_di \ ++ ut_dl \ ++ ut_zi \ ++ ut_zl ++ ++ut_di_SOURCES = ut.c ++ut_di_LDADD = $(top_builddir)/Source/libumfpack.la $(AMD_LIBS) $(SUITESPARSECONFIG_LIBS) -lm ++ut_di_CPPFLAGS = $(AM_CPPFLAGS) -DDINT ++ ++ut_dl_SOURCES = ut.c ++ut_dl_LDADD = $(top_builddir)/Source/libumfpack.la $(AMD_LIBS) $(SUITESPARSECONFIG_LIBS) -lm ++ut_dl_CPPFLAGS = $(AM_CPPFLAGS) -DDLONG ++ ++ut_zi_SOURCES = ut.c ++ut_zi_LDADD = $(top_builddir)/Source/libumfpack.la $(AMD_LIBS) $(SUITESPARSECONFIG_LIBS) -lm ++ut_zi_CPPFLAGS = $(AM_CPPFLAGS) -DZINT ++ ++ut_zl_SOURCES = ut.c ++ut_zl_LDADD = $(top_builddir)/Source/libumfpack.la $(AMD_LIBS) $(SUITESPARSECONFIG_LIBS) -lm ++ut_zl_CPPFLAGS = $(AM_CPPFLAGS) -DZLONG ++ ++check-local: $(check_PROGRAMS) ++ ./ut_di > ut_di.out ++ ./ut_dl > ut_dl.out ++ ./ut_zi > ut_zi.out ++ ./ut_zl > ut_zl.out ++endif ++ ++CLEANFILES = A500 n.umf numeric.umf s.umf symbolic.umf debug.amd debug.umf *.out +diff --git a/configure.ac b/configure.ac +new file mode 100644 +--- /dev/null ++++ b/configure.ac +@@ -0,0 +1,117 @@ ++# -*- Autoconf -*- ++# Process this file with autoconf to produce a configure script. ++ ++AC_PREREQ([2.69]) ++AC_INIT([UMFPACK],[5.7.6],[DrTimothyAldenDavis@gmail.com],[umfpack],[http://www.suitesparse.com/]) ++AC_CONFIG_SRCDIR([Source/umfpack_solve.c]) ++AC_CONFIG_AUX_DIR([build-aux]) ++AC_CONFIG_MACRO_DIR([m4]) ++AC_CONFIG_HEADERS([config.h]) ++AM_INIT_AUTOMAKE([foreign]) ++AM_SILENT_RULES([yes]) ++LT_INIT([disable-static]) ++ ++# Checks for programs. ++PKG_PROG_PKG_CONFIG ++AC_PROG_INSTALL ++AC_PROG_CC ++AC_PROG_F77 ++AX_CODE_COVERAGE ++ ++AC_ARG_WITH([cholmod], ++ [AS_HELP_STRING( ++ [--without-cholmod], ++ [do not use CHOLMOD for ordering methods])], ++ [], ++ [AS_VAR_SET([with_cholmod], [yes])]) ++ ++AS_VAR_SET([LIBS_SAVED], [$LIBS]) ++ ++# Checks for libraries. ++AC_CHECK_LIB([m], [sqrt]) ++ ++AX_BLAS( ++ [], ++ [AC_MSG_ERROR([cannot find BLAS])]) ++ ++PKG_CHECK_MODULES([SUITESPARSECONFIG], [suitesparseconfig]) ++PKG_CHECK_MODULES([AMD], [amd]) ++AS_VAR_SET([UMFPACK_REQUIRES], ["suitesparseconfig amd"]) ++ ++AS_IF([test "x$with_cholmod" = "xyes"], [ ++ PKG_CHECK_MODULES([CHOLMOD], [cholmod]) ++ AS_VAR_APPEND([UMFPACK_REQUIRES], [" cholmod"]) ++]) ++ ++# Checks for header files. ++AC_CHECK_HEADERS([float.h stdlib.h string.h]) ++ ++# Checks for typedefs, structures, and compiler characteristics. ++AC_TYPE_SIZE_T ++ ++# Checks for library functions. ++AC_FUNC_ERROR_AT_LINE ++AC_FUNC_MALLOC ++AC_CHECK_FUNCS([pow sqrt]) ++ ++AS_VAR_SET([LIBS], [$LIBS_SAVED]) ++ ++AC_MSG_CHECKING([whether to use CHOLMOD for ordering methods]) ++AC_MSG_RESULT([$with_cholmod]) ++AM_CONDITIONAL([CHOLMOD], [test "x$with_cholmod" = "xyes"]) ++ ++AC_SUBST([UMFPACK_REQUIRES]) ++ ++PKG_INSTALLDIR ++AC_CONFIG_FILES([ ++ umfpack.pc ++ Makefile ++ Demo/Makefile ++ Doc/Makefile ++ Include/Makefile ++ Source/Makefile ++ Tcov/Makefile ++]) ++AC_CONFIG_LINKS([Tcov/badnum.umf:Tcov/badnum.umf]) ++AC_CONFIG_LINKS([Tcov/badnum2.umf:Tcov/badnum2.umf]) ++AC_CONFIG_LINKS([Tcov/badsym.umf:Tcov/badsym.umf]) ++AC_CONFIG_LINKS([Tcov/badsym2.umf:Tcov/badsym2.umf]) ++#AC_CONFIG_LINKS([Tcov/TestMat:Tcov/TestMat]) # Can't link an entire directory? ++AC_CONFIG_LINKS([Tcov/TestMat/S_d2q06c:Tcov/TestMat/S_d2q06c]) ++AC_CONFIG_LINKS([Tcov/TestMat/adlittle:Tcov/TestMat/adlittle]) ++AC_CONFIG_LINKS([Tcov/TestMat/arc130:Tcov/TestMat/arc130]) ++AC_CONFIG_LINKS([Tcov/TestMat/cage3:Tcov/TestMat/cage3]) ++AC_CONFIG_LINKS([Tcov/TestMat/d_dyn:Tcov/TestMat/d_dyn]) ++AC_CONFIG_LINKS([Tcov/TestMat/galenet:Tcov/TestMat/galenet]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix1:Tcov/TestMat/matrix1]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix2:Tcov/TestMat/matrix2]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix3:Tcov/TestMat/matrix3]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix4:Tcov/TestMat/matrix4]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix5:Tcov/TestMat/matrix5]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix6:Tcov/TestMat/matrix6]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix7:Tcov/TestMat/matrix7]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix8:Tcov/TestMat/matrix8]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix10:Tcov/TestMat/matrix10]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix11:Tcov/TestMat/matrix11]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix12:Tcov/TestMat/matrix12]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix13:Tcov/TestMat/matrix13]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix14:Tcov/TestMat/matrix14]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix15:Tcov/TestMat/matrix15]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix16:Tcov/TestMat/matrix16]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix17:Tcov/TestMat/matrix17]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix18:Tcov/TestMat/matrix18]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix19:Tcov/TestMat/matrix19]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix20:Tcov/TestMat/matrix20]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix21:Tcov/TestMat/matrix21]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix22:Tcov/TestMat/matrix22]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix23:Tcov/TestMat/matrix23]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix24:Tcov/TestMat/matrix24]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix25:Tcov/TestMat/matrix25]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix26:Tcov/TestMat/matrix26]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix27:Tcov/TestMat/matrix27]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix28:Tcov/TestMat/matrix28]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix29:Tcov/TestMat/matrix29]) ++AC_CONFIG_LINKS([Tcov/TestMat/matrix30:Tcov/TestMat/matrix30]) ++AC_CONFIG_LINKS([Tcov/TestMat/nug07:Tcov/TestMat/nug07]) ++AC_CONFIG_LINKS([Tcov/TestMat/shl0:Tcov/TestMat/shl0]) ++AC_OUTPUT +diff --git a/m4/ax_blas.m4 b/m4/ax_blas.m4 +new file mode 100644 +--- /dev/null ++++ b/m4/ax_blas.m4 +@@ -0,0 +1,238 @@ ++# =========================================================================== ++# https://www.gnu.org/software/autoconf-archive/ax_blas.html ++# =========================================================================== ++# ++# SYNOPSIS ++# ++# AX_BLAS([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]]) ++# ++# DESCRIPTION ++# ++# This macro looks for a library that implements the BLAS linear-algebra ++# interface (see http://www.netlib.org/blas/). On success, it sets the ++# BLAS_LIBS output variable to hold the requisite library linkages. ++# ++# To link with BLAS, you should link with: ++# ++# $BLAS_LIBS $LIBS $FLIBS ++# ++# in that order. FLIBS is the output variable of the ++# AC_F77_LIBRARY_LDFLAGS macro (called if necessary by AX_BLAS), and is ++# sometimes necessary in order to link with F77 libraries. Users will also ++# need to use AC_F77_DUMMY_MAIN (see the autoconf manual), for the same ++# reason. ++# ++# Many libraries are searched for, from ATLAS to CXML to ESSL. The user ++# may also use --with-blas=<lib> in order to use some specific BLAS ++# library <lib>. In order to link successfully, however, be aware that you ++# will probably need to use the same Fortran compiler (which can be set ++# via the F77 env. var.) as was used to compile the BLAS library. ++# ++# ACTION-IF-FOUND is a list of shell commands to run if a BLAS library is ++# found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it is ++# not found. If ACTION-IF-FOUND is not specified, the default action will ++# define HAVE_BLAS. ++# ++# LICENSE ++# ++# Copyright (c) 2008 Steven G. Johnson <stevenj@alum.mit.edu> ++# ++# This program is free software: you can redistribute it and/or modify it ++# under the terms of the GNU General Public License as published by the ++# Free Software Foundation, either version 3 of the License, or (at your ++# option) any later version. ++# ++# This program is distributed in the hope that it will be useful, but ++# WITHOUT ANY WARRANTY; without even the implied warranty of ++# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General ++# Public License for more details. ++# ++# You should have received a copy of the GNU General Public License along ++# with this program. If not, see <https://www.gnu.org/licenses/>. ++# ++# As a special exception, the respective Autoconf Macro's copyright owner ++# gives unlimited permission to copy, distribute and modify the configure ++# scripts that are the output of Autoconf when processing the Macro. You ++# need not follow the terms of the GNU General Public License when using ++# or distributing such scripts, even though portions of the text of the ++# Macro appear in them. The GNU General Public License (GPL) does govern ++# all other use of the material that constitutes the Autoconf Macro. ++# ++# This special exception to the GPL applies to versions of the Autoconf ++# Macro released by the Autoconf Archive. When you make and distribute a ++# modified version of the Autoconf Macro, you may extend this special ++# exception to the GPL to apply to your modified version as well. ++ ++#serial 15 ++ ++AU_ALIAS([ACX_BLAS], [AX_BLAS]) ++AC_DEFUN([AX_BLAS], [ ++AC_PREREQ(2.50) ++AC_REQUIRE([AC_F77_LIBRARY_LDFLAGS]) ++AC_REQUIRE([AC_CANONICAL_HOST]) ++ax_blas_ok=no ++ ++AC_ARG_WITH(blas, ++ [AS_HELP_STRING([--with-blas=<lib>], [use BLAS library <lib>])]) ++case $with_blas in ++ yes | "") ;; ++ no) ax_blas_ok=disable ;; ++ -* | */* | *.a | *.so | *.so.* | *.o) BLAS_LIBS="$with_blas" ;; ++ *) BLAS_LIBS="-l$with_blas" ;; ++esac ++ ++# Get fortran linker names of BLAS functions to check for. ++AC_F77_FUNC(sgemm) ++AC_F77_FUNC(dgemm) ++ ++ax_blas_save_LIBS="$LIBS" ++LIBS="$LIBS $FLIBS" ++ ++# First, check BLAS_LIBS environment variable ++if test $ax_blas_ok = no; then ++if test "x$BLAS_LIBS" != x; then ++ save_LIBS="$LIBS"; LIBS="$BLAS_LIBS $LIBS" ++ AC_MSG_CHECKING([for $sgemm in $BLAS_LIBS]) ++ AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes], [BLAS_LIBS=""]) ++ AC_MSG_RESULT($ax_blas_ok) ++ LIBS="$save_LIBS" ++fi ++fi ++ ++# BLAS linked to by default? (happens on some supercomputers) ++if test $ax_blas_ok = no; then ++ save_LIBS="$LIBS"; LIBS="$LIBS" ++ AC_MSG_CHECKING([if $sgemm is being linked in already]) ++ AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes]) ++ AC_MSG_RESULT($ax_blas_ok) ++ LIBS="$save_LIBS" ++fi ++ ++# BLAS in OpenBLAS library? (http://xianyi.github.com/OpenBLAS/) ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(openblas, $sgemm, [ax_blas_ok=yes ++ BLAS_LIBS="-lopenblas"]) ++fi ++ ++# BLAS in ATLAS library? (http://math-atlas.sourceforge.net/) ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(atlas, ATL_xerbla, ++ [AC_CHECK_LIB(f77blas, $sgemm, ++ [AC_CHECK_LIB(cblas, cblas_dgemm, ++ [ax_blas_ok=yes ++ BLAS_LIBS="-lcblas -lf77blas -latlas"], ++ [], [-lf77blas -latlas])], ++ [], [-latlas])]) ++fi ++ ++# BLAS in PhiPACK libraries? (requires generic BLAS lib, too) ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(blas, $sgemm, ++ [AC_CHECK_LIB(dgemm, $dgemm, ++ [AC_CHECK_LIB(sgemm, $sgemm, ++ [ax_blas_ok=yes; BLAS_LIBS="-lsgemm -ldgemm -lblas"], ++ [], [-lblas])], ++ [], [-lblas])]) ++fi ++ ++# BLAS in Intel MKL library? ++if test $ax_blas_ok = no; then ++ # MKL for gfortran ++ if test x"$ac_cv_fc_compiler_gnu" = xyes; then ++ # 64 bit ++ if test $host_cpu = x86_64; then ++ AC_CHECK_LIB(mkl_gf_lp64, $sgemm, ++ [ax_blas_ok=yes;BLAS_LIBS="-lmkl_gf_lp64 -lmkl_sequential -lmkl_core -lpthread"],, ++ [-lmkl_gf_lp64 -lmkl_sequential -lmkl_core -lpthread]) ++ # 32 bit ++ elif test $host_cpu = i686; then ++ AC_CHECK_LIB(mkl_gf, $sgemm, ++ [ax_blas_ok=yes;BLAS_LIBS="-lmkl_gf -lmkl_sequential -lmkl_core -lpthread"],, ++ [-lmkl_gf -lmkl_sequential -lmkl_core -lpthread]) ++ fi ++ # MKL for other compilers (Intel, PGI, ...?) ++ else ++ # 64-bit ++ if test $host_cpu = x86_64; then ++ AC_CHECK_LIB(mkl_intel_lp64, $sgemm, ++ [ax_blas_ok=yes;BLAS_LIBS="-lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread"],, ++ [-lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread]) ++ # 32-bit ++ elif test $host_cpu = i686; then ++ AC_CHECK_LIB(mkl_intel, $sgemm, ++ [ax_blas_ok=yes;BLAS_LIBS="-lmkl_intel -lmkl_sequential -lmkl_core -lpthread"],, ++ [-lmkl_intel -lmkl_sequential -lmkl_core -lpthread]) ++ fi ++ fi ++fi ++# Old versions of MKL ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(mkl, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lmkl -lguide -lpthread"],,[-lguide -lpthread]) ++fi ++ ++# BLAS in Apple vecLib library? ++if test $ax_blas_ok = no; then ++ save_LIBS="$LIBS"; LIBS="-framework vecLib $LIBS" ++ AC_MSG_CHECKING([for $sgemm in -framework vecLib]) ++ AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes;BLAS_LIBS="-framework vecLib"]) ++ AC_MSG_RESULT($ax_blas_ok) ++ LIBS="$save_LIBS" ++fi ++ ++# BLAS in Alpha CXML library? ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(cxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lcxml"]) ++fi ++ ++# BLAS in Alpha DXML library? (now called CXML, see above) ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(dxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-ldxml"]) ++fi ++ ++# BLAS in Sun Performance library? ++if test $ax_blas_ok = no; then ++ if test "x$GCC" != xyes; then # only works with Sun CC ++ AC_CHECK_LIB(sunmath, acosp, ++ [AC_CHECK_LIB(sunperf, $sgemm, ++ [BLAS_LIBS="-xlic_lib=sunperf -lsunmath" ++ ax_blas_ok=yes],[],[-lsunmath])]) ++ fi ++fi ++ ++# BLAS in SCSL library? (SGI/Cray Scientific Library) ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(scs, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lscs"]) ++fi ++ ++# BLAS in SGIMATH library? ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(complib.sgimath, $sgemm, ++ [ax_blas_ok=yes; BLAS_LIBS="-lcomplib.sgimath"]) ++fi ++ ++# BLAS in IBM ESSL library? (requires generic BLAS lib, too) ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(blas, $sgemm, ++ [AC_CHECK_LIB(essl, $sgemm, ++ [ax_blas_ok=yes; BLAS_LIBS="-lessl -lblas"], ++ [], [-lblas $FLIBS])]) ++fi ++ ++# Generic BLAS library? ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(blas, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lblas"]) ++fi ++ ++AC_SUBST(BLAS_LIBS) ++ ++LIBS="$ax_blas_save_LIBS" ++ ++# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND: ++if test x"$ax_blas_ok" = xyes; then ++ ifelse([$1],,AC_DEFINE(HAVE_BLAS,1,[Define if you have a BLAS library.]),[$1]) ++ : ++else ++ ax_blas_ok=no ++ $2 ++fi ++])dnl AX_BLAS +diff --git a/m4/ax_code_coverage.m4 b/m4/ax_code_coverage.m4 +new file mode 100644 +--- /dev/null ++++ b/m4/ax_code_coverage.m4 +@@ -0,0 +1,264 @@ ++# =========================================================================== ++# https://www.gnu.org/software/autoconf-archive/ax_code_coverage.html ++# =========================================================================== ++# ++# SYNOPSIS ++# ++# AX_CODE_COVERAGE() ++# ++# DESCRIPTION ++# ++# Defines CODE_COVERAGE_CPPFLAGS, CODE_COVERAGE_CFLAGS, ++# CODE_COVERAGE_CXXFLAGS and CODE_COVERAGE_LIBS which should be included ++# in the CPPFLAGS, CFLAGS CXXFLAGS and LIBS/LIBADD variables of every ++# build target (program or library) which should be built with code ++# coverage support. Also defines CODE_COVERAGE_RULES which should be ++# substituted in your Makefile; and $enable_code_coverage which can be ++# used in subsequent configure output. CODE_COVERAGE_ENABLED is defined ++# and substituted, and corresponds to the value of the ++# --enable-code-coverage option, which defaults to being disabled. ++# ++# Test also for gcov program and create GCOV variable that could be ++# substituted. ++# ++# Note that all optimization flags in CFLAGS must be disabled when code ++# coverage is enabled. ++# ++# Usage example: ++# ++# configure.ac: ++# ++# AX_CODE_COVERAGE ++# ++# Makefile.am: ++# ++# @CODE_COVERAGE_RULES@ ++# my_program_LIBS = ... $(CODE_COVERAGE_LIBS) ... ++# my_program_CPPFLAGS = ... $(CODE_COVERAGE_CPPFLAGS) ... ++# my_program_CFLAGS = ... $(CODE_COVERAGE_CFLAGS) ... ++# my_program_CXXFLAGS = ... $(CODE_COVERAGE_CXXFLAGS) ... ++# ++# This results in a "check-code-coverage" rule being added to any ++# Makefile.am which includes "@CODE_COVERAGE_RULES@" (assuming the module ++# has been configured with --enable-code-coverage). Running `make ++# check-code-coverage` in that directory will run the module's test suite ++# (`make check`) and build a code coverage report detailing the code which ++# was touched, then print the URI for the report. ++# ++# In earlier versions of this macro, CODE_COVERAGE_LDFLAGS was defined ++# instead of CODE_COVERAGE_LIBS. They are both still defined, but use of ++# CODE_COVERAGE_LIBS is preferred for clarity; CODE_COVERAGE_LDFLAGS is ++# deprecated. They have the same value. ++# ++# This code was derived from Makefile.decl in GLib, originally licenced ++# under LGPLv2.1+. ++# ++# LICENSE ++# ++# Copyright (c) 2012, 2016 Philip Withnall ++# Copyright (c) 2012 Xan Lopez ++# Copyright (c) 2012 Christian Persch ++# Copyright (c) 2012 Paolo Borelli ++# Copyright (c) 2012 Dan Winship ++# Copyright (c) 2015 Bastien ROUCARIES ++# ++# This library is free software; you can redistribute it and/or modify it ++# under the terms of the GNU Lesser General Public License as published by ++# the Free Software Foundation; either version 2.1 of the License, or (at ++# your option) any later version. ++# ++# This library is distributed in the hope that it will be useful, but ++# WITHOUT ANY WARRANTY; without even the implied warranty of ++# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser ++# General Public License for more details. ++# ++# You should have received a copy of the GNU Lesser General Public License ++# along with this program. If not, see <https://www.gnu.org/licenses/>. ++ ++#serial 24 ++ ++AC_DEFUN([AX_CODE_COVERAGE],[ ++ dnl Check for --enable-code-coverage ++ AC_REQUIRE([AC_PROG_SED]) ++ ++ # allow to override gcov location ++ AC_ARG_WITH([gcov], ++ [AS_HELP_STRING([--with-gcov[=GCOV]], [use given GCOV for coverage (GCOV=gcov).])], ++ [_AX_CODE_COVERAGE_GCOV_PROG_WITH=$with_gcov], ++ [_AX_CODE_COVERAGE_GCOV_PROG_WITH=gcov]) ++ ++ AC_MSG_CHECKING([whether to build with code coverage support]) ++ AC_ARG_ENABLE([code-coverage], ++ AS_HELP_STRING([--enable-code-coverage], ++ [Whether to enable code coverage support]),, ++ enable_code_coverage=no) ++ ++ AM_CONDITIONAL([CODE_COVERAGE_ENABLED], [test x$enable_code_coverage = xyes]) ++ AC_SUBST([CODE_COVERAGE_ENABLED], [$enable_code_coverage]) ++ AC_MSG_RESULT($enable_code_coverage) ++ ++ AS_IF([ test "$enable_code_coverage" = "yes" ], [ ++ # check for gcov ++ AC_CHECK_TOOL([GCOV], ++ [$_AX_CODE_COVERAGE_GCOV_PROG_WITH], ++ [:]) ++ AS_IF([test "X$GCOV" = "X:"], ++ [AC_MSG_ERROR([gcov is needed to do coverage])]) ++ AC_SUBST([GCOV]) ++ ++ dnl Check if gcc is being used ++ AS_IF([ test "$GCC" = "no" ], [ ++ AC_MSG_ERROR([not compiling with gcc, which is required for gcov code coverage]) ++ ]) ++ ++ AC_CHECK_PROG([LCOV], [lcov], [lcov]) ++ AC_CHECK_PROG([GENHTML], [genhtml], [genhtml]) ++ ++ AS_IF([ test -z "$LCOV" ], [ ++ AC_MSG_ERROR([To enable code coverage reporting you must have lcov installed]) ++ ]) ++ ++ AS_IF([ test -z "$GENHTML" ], [ ++ AC_MSG_ERROR([Could not find genhtml from the lcov package]) ++ ]) ++ ++ dnl Build the code coverage flags ++ dnl Define CODE_COVERAGE_LDFLAGS for backwards compatibility ++ CODE_COVERAGE_CPPFLAGS="-DNDEBUG" ++ CODE_COVERAGE_CFLAGS="-O0 -g -fprofile-arcs -ftest-coverage" ++ CODE_COVERAGE_CXXFLAGS="-O0 -g -fprofile-arcs -ftest-coverage" ++ CODE_COVERAGE_LIBS="-lgcov" ++ CODE_COVERAGE_LDFLAGS="$CODE_COVERAGE_LIBS" ++ ++ AC_SUBST([CODE_COVERAGE_CPPFLAGS]) ++ AC_SUBST([CODE_COVERAGE_CFLAGS]) ++ AC_SUBST([CODE_COVERAGE_CXXFLAGS]) ++ AC_SUBST([CODE_COVERAGE_LIBS]) ++ AC_SUBST([CODE_COVERAGE_LDFLAGS]) ++ ++ [CODE_COVERAGE_RULES_CHECK=' ++ -$(A''M_V_at)$(MAKE) $(AM_MAKEFLAGS) -k check ++ $(A''M_V_at)$(MAKE) $(AM_MAKEFLAGS) code-coverage-capture ++'] ++ [CODE_COVERAGE_RULES_CAPTURE=' ++ $(code_coverage_v_lcov_cap)$(LCOV) $(code_coverage_quiet) $(addprefix --directory ,$(CODE_COVERAGE_DIRECTORY)) --capture --output-file "$(CODE_COVERAGE_OUTPUT_FILE).tmp" --test-name "$(call code_coverage_sanitize,$(PACKAGE_NAME)-$(PACKAGE_VERSION))" --no-checksum --compat-libtool $(CODE_COVERAGE_LCOV_SHOPTS) $(CODE_COVERAGE_LCOV_OPTIONS) ++ $(code_coverage_v_lcov_ign)$(LCOV) $(code_coverage_quiet) $(addprefix --directory ,$(CODE_COVERAGE_DIRECTORY)) --remove "$(CODE_COVERAGE_OUTPUT_FILE).tmp" "/tmp/*" $(CODE_COVERAGE_IGNORE_PATTERN) --output-file "$(CODE_COVERAGE_OUTPUT_FILE)" $(CODE_COVERAGE_LCOV_SHOPTS) $(CODE_COVERAGE_LCOV_RMOPTS) ++ -@rm -f $(CODE_COVERAGE_OUTPUT_FILE).tmp ++ $(code_coverage_v_genhtml)LANG=C $(GENHTML) $(code_coverage_quiet) $(addprefix --prefix ,$(CODE_COVERAGE_DIRECTORY)) --output-directory "$(CODE_COVERAGE_OUTPUT_DIRECTORY)" --title "$(PACKAGE_NAME)-$(PACKAGE_VERSION) Code Coverage" --legend --show-details "$(CODE_COVERAGE_OUTPUT_FILE)" $(CODE_COVERAGE_GENHTML_OPTIONS) ++ @echo "file://$(abs_builddir)/$(CODE_COVERAGE_OUTPUT_DIRECTORY)/index.html" ++'] ++ [CODE_COVERAGE_RULES_CLEAN=' ++clean: code-coverage-clean ++distclean: code-coverage-clean ++code-coverage-clean: ++ -$(LCOV) --directory $(top_builddir) -z ++ -rm -rf $(CODE_COVERAGE_OUTPUT_FILE) $(CODE_COVERAGE_OUTPUT_FILE).tmp $(CODE_COVERAGE_OUTPUT_DIRECTORY) ++ -find . \( -name "*.gcda" -o -name "*.gcno" -o -name "*.gcov" \) -delete ++'] ++ ], [ ++ [CODE_COVERAGE_RULES_CHECK=' ++ @echo "Need to reconfigure with --enable-code-coverage" ++'] ++ CODE_COVERAGE_RULES_CAPTURE="$CODE_COVERAGE_RULES_CHECK" ++ CODE_COVERAGE_RULES_CLEAN='' ++ ]) ++ ++[CODE_COVERAGE_RULES=' ++# Code coverage ++# ++# Optional: ++# - CODE_COVERAGE_DIRECTORY: Top-level directory for code coverage reporting. ++# Multiple directories may be specified, separated by whitespace. ++# (Default: $(top_builddir)) ++# - CODE_COVERAGE_OUTPUT_FILE: Filename and path for the .info file generated ++# by lcov for code coverage. (Default: ++# $(PACKAGE_NAME)-$(PACKAGE_VERSION)-coverage.info) ++# - CODE_COVERAGE_OUTPUT_DIRECTORY: Directory for generated code coverage ++# reports to be created. (Default: ++# $(PACKAGE_NAME)-$(PACKAGE_VERSION)-coverage) ++# - CODE_COVERAGE_BRANCH_COVERAGE: Set to 1 to enforce branch coverage, ++# set to 0 to disable it and leave empty to stay with the default. ++# (Default: empty) ++# - CODE_COVERAGE_LCOV_SHOPTS_DEFAULT: Extra options shared between both lcov ++# instances. (Default: based on $CODE_COVERAGE_BRANCH_COVERAGE) ++# - CODE_COVERAGE_LCOV_SHOPTS: Extra options to shared between both lcov ++# instances. (Default: $CODE_COVERAGE_LCOV_SHOPTS_DEFAULT) ++# - CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH: --gcov-tool pathtogcov ++# - CODE_COVERAGE_LCOV_OPTIONS_DEFAULT: Extra options to pass to the ++# collecting lcov instance. (Default: $CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH) ++# - CODE_COVERAGE_LCOV_OPTIONS: Extra options to pass to the collecting lcov ++# instance. (Default: $CODE_COVERAGE_LCOV_OPTIONS_DEFAULT) ++# - CODE_COVERAGE_LCOV_RMOPTS_DEFAULT: Extra options to pass to the filtering ++# lcov instance. (Default: empty) ++# - CODE_COVERAGE_LCOV_RMOPTS: Extra options to pass to the filtering lcov ++# instance. (Default: $CODE_COVERAGE_LCOV_RMOPTS_DEFAULT) ++# - CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT: Extra options to pass to the ++# genhtml instance. (Default: based on $CODE_COVERAGE_BRANCH_COVERAGE) ++# - CODE_COVERAGE_GENHTML_OPTIONS: Extra options to pass to the genhtml ++# instance. (Default: $CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT) ++# - CODE_COVERAGE_IGNORE_PATTERN: Extra glob pattern of files to ignore ++# ++# The generated report will be titled using the $(PACKAGE_NAME) and ++# $(PACKAGE_VERSION). In order to add the current git hash to the title, ++# use the git-version-gen script, available online. ++ ++# Optional variables ++CODE_COVERAGE_DIRECTORY ?= $(top_builddir) ++CODE_COVERAGE_OUTPUT_FILE ?= $(PACKAGE_NAME)-$(PACKAGE_VERSION)-coverage.info ++CODE_COVERAGE_OUTPUT_DIRECTORY ?= $(PACKAGE_NAME)-$(PACKAGE_VERSION)-coverage ++CODE_COVERAGE_BRANCH_COVERAGE ?= ++CODE_COVERAGE_LCOV_SHOPTS_DEFAULT ?= $(if $(CODE_COVERAGE_BRANCH_COVERAGE),\ ++--rc lcov_branch_coverage=$(CODE_COVERAGE_BRANCH_COVERAGE)) ++CODE_COVERAGE_LCOV_SHOPTS ?= $(CODE_COVERAGE_LCOV_SHOPTS_DEFAULT) ++CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH ?= --gcov-tool "$(GCOV)" ++CODE_COVERAGE_LCOV_OPTIONS_DEFAULT ?= $(CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH) ++CODE_COVERAGE_LCOV_OPTIONS ?= $(CODE_COVERAGE_LCOV_OPTIONS_DEFAULT) ++CODE_COVERAGE_LCOV_RMOPTS_DEFAULT ?= ++CODE_COVERAGE_LCOV_RMOPTS ?= $(CODE_COVERAGE_LCOV_RMOPTS_DEFAULT) ++CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT ?=\ ++$(if $(CODE_COVERAGE_BRANCH_COVERAGE),\ ++--rc genhtml_branch_coverage=$(CODE_COVERAGE_BRANCH_COVERAGE)) ++CODE_COVERAGE_GENHTML_OPTIONS ?= $(CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT) ++CODE_COVERAGE_IGNORE_PATTERN ?= ++ ++code_coverage_v_lcov_cap = $(code_coverage_v_lcov_cap_$(V)) ++code_coverage_v_lcov_cap_ = $(code_coverage_v_lcov_cap_$(AM_DEFAULT_VERBOSITY)) ++code_coverage_v_lcov_cap_0 = @echo " LCOV --capture"\ ++ $(CODE_COVERAGE_OUTPUT_FILE); ++code_coverage_v_lcov_ign = $(code_coverage_v_lcov_ign_$(V)) ++code_coverage_v_lcov_ign_ = $(code_coverage_v_lcov_ign_$(AM_DEFAULT_VERBOSITY)) ++code_coverage_v_lcov_ign_0 = @echo " LCOV --remove /tmp/*"\ ++ $(CODE_COVERAGE_IGNORE_PATTERN); ++code_coverage_v_genhtml = $(code_coverage_v_genhtml_$(V)) ++code_coverage_v_genhtml_ = $(code_coverage_v_genhtml_$(AM_DEFAULT_VERBOSITY)) ++code_coverage_v_genhtml_0 = @echo " GEN " $(CODE_COVERAGE_OUTPUT_DIRECTORY); ++code_coverage_quiet = $(code_coverage_quiet_$(V)) ++code_coverage_quiet_ = $(code_coverage_quiet_$(AM_DEFAULT_VERBOSITY)) ++code_coverage_quiet_0 = --quiet ++ ++# sanitizes the test-name: replaces with underscores: dashes and dots ++code_coverage_sanitize = $(subst -,_,$(subst .,_,$(1))) ++ ++# Use recursive makes in order to ignore errors during check ++check-code-coverage:'"$CODE_COVERAGE_RULES_CHECK"' ++ ++# Capture code coverage data ++code-coverage-capture: code-coverage-capture-hook'"$CODE_COVERAGE_RULES_CAPTURE"' ++ ++# Hook rule executed before code-coverage-capture, overridable by the user ++code-coverage-capture-hook: ++ ++'"$CODE_COVERAGE_RULES_CLEAN"' ++ ++GITIGNOREFILES ?= ++GITIGNOREFILES += $(CODE_COVERAGE_OUTPUT_FILE) $(CODE_COVERAGE_OUTPUT_DIRECTORY) ++ ++A''M_DISTCHECK_CONFIGURE_FLAGS ?= ++A''M_DISTCHECK_CONFIGURE_FLAGS += --disable-code-coverage ++ ++.PHONY: check-code-coverage code-coverage-capture code-coverage-capture-hook code-coverage-clean ++'] ++ ++ AC_SUBST([CODE_COVERAGE_RULES]) ++ m4_ifdef([_AM_SUBST_NOTMAKE], [_AM_SUBST_NOTMAKE([CODE_COVERAGE_RULES])]) ++]) +diff --git a/umfpack.pc.in b/umfpack.pc.in +new file mode 100644 +--- /dev/null ++++ b/umfpack.pc.in +@@ -0,0 +1,13 @@ ++prefix=@prefix@ ++exec_prefix=@exec_prefix@ ++libdir=@libdir@ ++includedir=@includedir@ ++ ++Name: @PACKAGE_NAME@ ++Description: Sparse multifrontal LU factorization ++Version: @PACKAGE_VERSION@ ++URL: @PACKAGE_URL@ ++Requires.private: @UMFPACK_REQUIRES@ ++Libs: -L${libdir} -lumfpack ++Libs.private: @BLAS_LIBS@ -lm ++Cflags: -I${includedir}/umfpack |