diff options
Diffstat (limited to 'academic/pysam/pysam.SlackBuild')
| -rw-r--r-- | academic/pysam/pysam.SlackBuild | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/academic/pysam/pysam.SlackBuild b/academic/pysam/pysam.SlackBuild index 48a8ef263feef..dcbc06e1a63d5 100644 --- a/academic/pysam/pysam.SlackBuild +++ b/academic/pysam/pysam.SlackBuild @@ -25,7 +25,7 @@ PRGNAM=pysam VERSION=${VERSION:-0.16.0.1} -BUILD=${BUILD:-1} +BUILD=${BUILD:-3} TAG=${TAG:-_SBo} #set which python version to install it for @@ -75,10 +75,10 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; -### pysam now linked to htslib-1.10 so this can be done again: +### pysam linked to htslib-1.10; SBo-htslib is at 1.11: ##use system htslib: -export HTSLIB_LIBRARY_DIR=/usr/lib$LIBDIRSUFFIX -export HTSLIB_INCLUDE_DIR=/usr/include +#export HTSLIB_LIBRARY_DIR=/usr/lib$LIBDIRSUFFIX +#export HTSLIB_INCLUDE_DIR=/usr/include #the source does not allow 'read' to 'other', which could cause a problem on reloading a Jupyter-notebook chmod 644 pysam.egg-info/* |