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diff --git a/academic/flexbar/README b/academic/flexbar/README new file mode 100644 index 000000000000..ed016820d862 --- /dev/null +++ b/academic/flexbar/README @@ -0,0 +1,18 @@ +The program Flexbar preprocesses high-throughput sequencing data +efficiently. It demultiplexes barcoded runs and removes adapter +sequences. Moreover, trimming and filtering features are provided. +Flexbar increases read mapping rates and improves genome as well as +transcriptome assemblies. It supports next-generation sequencing data +in fasta and fastq format, e.g. from Roche 454 and the Illumina +platform. + +The script downloads the segan-library needed for compilation. + +References + +Johannes T. Roehr, Christoph Dieterich, Knut Reinert: +Flexbar 3.0 - SIMD and multicore parallelization. Bioinformatics 2017. + +Matthias Dodt, Johannes T. Roehr, Rina Ahmed, Christoph Dieterich: +Flexbar - flexible barcode and adapter processing for next-generation +sequencing platforms. Biology 2012. |