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diff --git a/academic/copasi/README b/academic/copasi/README new file mode 100644 index 0000000000000..e32cb06d9c9db --- /dev/null +++ b/academic/copasi/README @@ -0,0 +1,16 @@ +COPASI is a package for modeling and simulation of biochemical networks, +popular in the field of systems biology. + +COPASI is a stand-alone program that simulates models of biochemical +networks using ODE solvers or Gillespie's stochastic simulation +algorithm. COPASI is compatible with models in SBML format. It also +performs several analyses, such as steady state, stability, parameter +sensitivity, elementary modes, Lyapunov exponents, optimization, and +parameter estimation. Data can be visualized in plots, histograms and +animations of network diagrams. COPASI's GUI is based on QT, but a +command line version is also included that allows for processing +computations in batch mode. + +COPASI is a collaboration between research groups at the Virginia +Bioinformatics Institute, University of Heidelberg, University of +Manchester and previously in the EML-Research. |