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Diffstat (limited to 'academic/PhyML/README')
| -rw-r--r-- | academic/PhyML/README | 11 |
1 files changed, 3 insertions, 8 deletions
diff --git a/academic/PhyML/README b/academic/PhyML/README index fd66cda1231a7..b6ce38f0bd4d9 100644 --- a/academic/PhyML/README +++ b/academic/PhyML/README @@ -9,16 +9,11 @@ It also implements two methods to evaluate branch supports in a sound statistical framework (the non-parametric bootstrap and the approximate likelihood ratio test). -NOTE 1: This also builds Phyrex and the MPI (using multiple processors) -version of PhyML. The executable of the latter is called phyml-mpi and -requires openmpi. If you do not want them to be built in the package, +This also builds MPI (using multiple processors) version of PhyML, which +requires 'openmpi'. Other additional programs built by the script are +Phyrex and PhyTime. If you do not want them to be built in the package, check the SlackBuild script. -NOTE 2: PhyTime used to be part of the PhyML package. However, PhyTime -from the latest releases of PhyML does not build anymore. meanwhile, -PhyTime is available separately, which installs the latest version that -builds. - For details and citation New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0. Guindon S., |