diff options
Diffstat (limited to 'academic/PhyML/PhyML.SlackBuild')
| -rw-r--r-- | academic/PhyML/PhyML.SlackBuild | 35 |
1 files changed, 28 insertions, 7 deletions
diff --git a/academic/PhyML/PhyML.SlackBuild b/academic/PhyML/PhyML.SlackBuild index 9946b20954c90..3578b7288c51e 100644 --- a/academic/PhyML/PhyML.SlackBuild +++ b/academic/PhyML/PhyML.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for PhyML -# Copyright 2011-2013 Petar Petrov, ppetrov@paju.oulu.fi +# Copyright 2011-2013 Petar Petrov, petar.petrov@student.oulu.fi # All rights reserved. # # Redistribution and use of this script, with or without modification, is @@ -25,7 +25,7 @@ # Thanks to Niels Horn for some handy modifications and corrections. PRGNAM=PhyML -VERSION=${VERSION:-20130219} +VERSION=${VERSION:-20131112} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} @@ -69,16 +69,17 @@ tar xvf $CWD/$SRCNAM-$SRCVER.tar.gz cd $SRCNAM-$SRCVER chown -R root:root . find -L . \ - \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 -o -perm 511 \) \ - -exec chmod 755 {} \; -o \ - \( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \ - -exec chmod 644 {} \; + \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \ + -o -perm 511 \) -exec chmod 755 {} \; -o \ + \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ + -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; -# Apply patch 20130219 +# Apply version patch cd src patch -i $CWD/$VERSION.patch cd .. +# This is PhyML ./configure \ --prefix=/usr \ --libdir=/usr/lib${LIBDIRSUFFIX} \ @@ -97,6 +98,26 @@ CXXFLAGS="$SLKCFLAGS" \ make make install DESTDIR=$PKG +# And this is PhyTime +./configure \ + --prefix=/usr \ + --libdir=/usr/lib${LIBDIRSUFFIX} \ + --sysconfdir=/etc \ + --localstatedir=/var \ + --enable-phytime \ + --mandir=/usr/man \ + --docdir=/usr/doc/$PRGNAM-$VERSION \ + --build=$ARCH-slackware-linux + +# Use our CFLAGS +sed -i "/^CFLAGS/s/=/+=/" src/Makefile +sed -i "/^CFLAGS/s/=/+=/" Makefile + +CFLAGS="$SLKCFLAGS" \ +CXXFLAGS="$SLKCFLAGS" \ +make +make install DESTDIR=$PKG + find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \ | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true |