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Diffstat (limited to 'academic/IGV/IGV.SlackBuild')
-rw-r--r-- | academic/IGV/IGV.SlackBuild | 84 |
1 files changed, 84 insertions, 0 deletions
diff --git a/academic/IGV/IGV.SlackBuild b/academic/IGV/IGV.SlackBuild new file mode 100644 index 0000000000000..746d394ea4da5 --- /dev/null +++ b/academic/IGV/IGV.SlackBuild @@ -0,0 +1,84 @@ +#!/bin/sh + +# Slackware build script for IGV + +# Copyright 2020 Petar Petrov slackalaxy@gmail.com +# All rights reserved. +# +# Redistribution and use of this script, with or without modification, is +# permitted provided that the following conditions are met: +# +# 1. Redistributions of this script must retain the above copyright +# notice, this list of conditions and the following disclaimer. +# +# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED +# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF +# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO +# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, +# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, +# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; +# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, +# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR +# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF +# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + +PRGNAM=IGV +VERSION=${VERSION:-2.8.12} +BUILD=${BUILD:-1} +TAG=${TAG:-_SBo} + +JDK=jdk-11 + +if [ -z "$ARCH" ]; then + ARCH="$( uname -m )" +fi + +if [ "$ARCH" != "x86_64" ]; then + printf "\n\n$ARCH is not supported... \n" >&2 + exit 1 +fi + +CWD=$(pwd) +TMP=${TMP:-/tmp/SBo} +PKG=$TMP/package-$PRGNAM +OUTPUT=${OUTPUT:-/tmp} + +set -e + +rm -rf $PKG +mkdir -p $TMP $PKG $OUTPUT +cd $TMP +rm -rf ${PRGNAM}_Linux_${VERSION} +unzip $CWD/${PRGNAM}_Linux_${VERSION}_WithJava.zip +cd ${PRGNAM}_Linux_${VERSION} +chown -R root:root . +find -L . \ + \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \ + -o -perm 511 \) -exec chmod 755 {} \; -o \ + \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ + -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; + +# Place it in /opt and make a symlink later +mkdir -p $PKG/opt/$PRGNAM +cp -a $JDK lib igv.args igv.sh igv_hidpi.sh $PKG/opt/$PRGNAM + +mkdir -p $PKG/usr/share/{applications,pixmaps} +cp IGV_64.png $PKG/usr/share/pixmaps/$PRGNAM.png +cp $CWD/$PRGNAM.desktop $PKG/usr/share/applications + +mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION +cp -a readme.txt $PKG/usr/doc/$PRGNAM-$VERSION +cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild +cat $CWD/References > $PKG/usr/doc/$PRGNAM-$VERSION/References + +mkdir -p $PKG/usr/bin +cd $PKG/usr/bin +ln -s ../../opt/$PRGNAM/igv.sh igv +cd - + +mkdir -p $PKG/install +cat $CWD/slack-desc > $PKG/install/slack-desc +cat $CWD/doinst.sh > $PKG/install/doinst.sh + +cd $PKG +/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz} |