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-rw-r--r--ChangeLog.txt128
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+Sat Dec 14 17:01:37 UTC 2013
+academic/EMBASSY: Updated for version 6.6.0.
+academic/EMBOSS: Updated for version 6.6.0.
+academic/PhyML: Updated for version 20131112.
+academic/bowtie2: Added (A tool for aligning sequencing reads).
+academic/bowtie: Updated for version 1.0.0.
+academic/cistrome-CEAS: Added (Cis-regulatory Element Annotation).
+academic/cistrome-MACS: Added (Model-based Analysis of ChIP-Seq).
+academic/cufflinks: Added (reference-guided assembler for RNA-Seq).
+academic/geoserver-control-flow: Added (request rate limitation)
+academic/geoserver-pyramid: Added (pyramid data store support)
+academic/mafft: Updated for version 7.130.
+academic/mkDSSP: Updated for version 2.2.1.
+academic/mrbayes: Updated for version 3.2.2.
+academic/paml: Added (Phylogenetic Analysis by Maximum Likelihood).
+academic/pamlX: Added (A GUI for PAML).
+academic/primer3: Updated for version 2.3.6.
+academic/samtools: Added (Sequence Alignment/Map Tools).
+academic/t_coffee: Updated for version 10.00.r1613.
+academic/tabix: Added (Generic indexer).
+academic/topdraw: Added (A sketchpad for protein topology diagrams).
+academic/tophat: Added (Splice junction mapper for RNA-Seq reads).
+academic/ugene: Updated for version 1.13.0.
+academic/vcftools: Added (A program designed for working with VCF).
+audio/mpd: Added optional deps + New Maintainer.
+audio/opus-tools: Added (utilities for opus)
+audio/opus: Updated for version 1.1.
+audio/opusfile: Added (opus decoding API)
+desktop/awesome: Removed note from the README
+desktop/copyq: Added (clipboard manager with advanced features).
+desktop/murrine-themes: Updated for version 0.98.6.
+desktop/screenfetch: Updated for version 3.2.2.
+desktop/thunar-sendto-clamtk: Updated for version 0.04.
+desktop/yawp: Updated for version 0.4.5.
+development/Cython: Updated for version 0.19.2.
+development/MySQL-python: Avoid downloading distribute during build.
+development/acpica: Updated for version 20131115.
+development/avra: Added (Atmel AVR Microcontrollers Assembler).
+development/geany-plugins: New Maintainer.
+development/mono-addins: Updated for version 20131127.
+development/mono: Updated for version 3.2.3.
+development/monodevelop-database: Updated for version 4.2.1.
+development/monodevelop-debugger-gdb: Updated for version 4.2.1.
+development/monodevelop: Updated for version 4.2.1.
+development/trac: New maintainer.
+games/Scorched3D: Updated for version 43.3d.
+games/angband: Added license.
+games/fortune_doctor_who: Added (quotes from Doctor Who).
+games/supertux2: Updated for version 0.3.4.
+games/xonotic: New maintainer, small clean up.
+graphics/digikam: Cleanup + added additional optional deps.
+graphics/goocanvas: Changed homepage.
+graphics/luxblend25: Added (LuxRender's interface for Blender 2.6x).
+graphics/luxrender: Added (rendering engine).
+graphics/pinta: Updated for version 20131027.
+graphics/shotwell: Added (Open source photo manager for GNOME)
+libraries/SFCGAL: Added (C++ wrapper around CGAL).
+libraries/dbus-sharp-glib: Added (a C# implementation of dbus-glib).
+libraries/dbus-sharp: Added (C# implementation of D-Bus).
+libraries/elementary: Added (toolkit set).
+libraries/emotion: Added (video library).
+libraries/ethumb: Added (thumbnail lib).
+libraries/genshi: Updated for version 0.7, new maintainer.
+libraries/goffice: Updated for version 0.10.9 + New Maintainer.
+libraries/gtk-sharp: Updated for version 2.12.22.
+libraries/lensfun: Switching to cmake, New maintainer.
+libraries/libburn: Updated for version 1.3.4.
+libraries/libgee1: Added (GObject-based interfaces and classes)
+libraries/libgee: Updated for version 0.12.0.
+libraries/libisoburn: Updated for version 1.3.4.
+libraries/libisofs: Updated for version 1.3.4.
+libraries/libquvi-scripts: Updated for version 0.4.21.
+libraries/libskk: Update deps to libgee1.
+libraries/libsuinput: Added (Thin userspace library)
+libraries/libx86emu: Updated for version 1.4.
+libraries/mysql-connector-python: Fix download link.
+libraries/ndesk-dbus-glib: Removed (Replaced by dbus-sharp-glib).
+libraries/ndesk-dbus: Removed (Replaced by dbus-sharp).
+libraries/notify-sharp: Updated for version 0.4.1.
+libraries/squish: Added (open-source DXT compression library).
+misc/WhatPulse: Removed (no SBo maintainer).
+misc/ibus-fbterm: Removed (no SBo maintainer)
+misc/ibus-hangul: Removed (no SBo maintainer)
+multimedia/guvcview: Updated for version 1.7.2.
+multimedia/plexmediaserver: Added (media center server).
+network/aoetools: Added (ATA Over Ethernet).
+network/bitcoin: Updated for version 0.8.6.
+network/cclive: Updated for version 0.7.16 + New Maintainer.
+network/libquvi: Use Shared Libs + New Maintainer.
+network/mangler: Removed (no SBo maintainer).
+network/mumble: New Maintainer.
+network/murmur: New Maintainer.
+network/opensmtpd: Updated for version 5.4.1p1.
+network/phpmyadmin: Updated for version 4.1.0.
+network/quvi: New Maintainer.
+network/weechat: Updated for version 0.4.2.
+office/gnumeric: Updated for version 1.12.9.
+office/pdfpc: Update deps to libgee1.
+perl/perl-Scalar-List-Utils: Added (Scalar and List Subroutines).
+perl/perl-Text-CSV: Added (Perl Text::CSV module).
+perl/perl-Time-Piece: Added (Perl Time::Piece module).
+python/psutil: Updated for version 1.2.1.
+python/pygoocanvas: Changed homepage.
+system/apache-tomcat: Fix location of tomcat-juli.jar.
+system/clamtk: Updated for version 5.01.
+system/eventlog: Updated for version 0.2.12+20120504+1700.
+system/gparted: Updated for version 0.17.0.
+system/hermit-font: Added (monospace font for programming).
+system/hwinfo: Updated for version 20.1.
+system/kc: Updated for version 2.3.2.
+system/libscrypt: Added (library that implements scrypt()).
+system/postgis: Add SFCGAL as an optional dependency.
+system/rsyslog: Updated for version 7.4.6.
+system/scrypt: Use SLKCFLAGS.
+system/spl-solaris: Added (solaris kernel API for linux).
+system/syslog-ng: Updated for version 3.5.2.
+system/tagainijisho: Added (Japanese dictionary and kanji lookup).
+system/terminology: Added (terminal emulator).
+system/thermal_daemon: Added (Linux Thermal Daemon).
+system/vagrant: Added (virtual development environments).
+system/vbindiff: Added (visual binary diff).
+system/virtualbox-addons: Updated for version 4.3.4.
+system/virtualbox-kernel-addons: Updated for version 4.3.4.
+system/virtualbox-kernel: Updated for version 4.3.4.
+system/virtualbox: Updated for version 4.3.4.
+system/xfsudo: Added (run graphical apps as root using sudo).
+system/zfs-on-linux: Added (native linux port of ZFS).
++--------------------------+
Fri Dec 6 06:07:53 UTC 2013
academic/geogit: Updated for version 0.6.0.
audio/milkytracker: Updated for version 0.90.86.