diff options
| author | brobr <sborg63@disroot.org> | 2023-04-13 18:18:50 +0100 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2023-04-15 07:15:40 +0700 |
| commit | 904f86ada51dd1b16103861f36958f46d9921be7 (patch) | |
| tree | 356bc921725046ed51f7fd3b9ec33e51afac92c2 /academic | |
| parent | dab259a9b2eeaee7f5f77eb3c388fb94412afb25 (diff) | |
academic/fastqc: Updated for version 0.12.1.
Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com>
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic')
| -rw-r--r-- | academic/fastqc/fastqc.SlackBuild | 10 | ||||
| -rw-r--r-- | academic/fastqc/fastqc.info | 8 |
2 files changed, 9 insertions, 9 deletions
diff --git a/academic/fastqc/fastqc.SlackBuild b/academic/fastqc/fastqc.SlackBuild index e1e1cf5a59d2..e6fff3aa30c8 100644 --- a/academic/fastqc/fastqc.SlackBuild +++ b/academic/fastqc/fastqc.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for fastqc -# Copyright 2015-2018 Petar Petrov slackalaxy@gmail.com; 2018-2020 Rob van Nues sborg63.org +# Copyright 2015-2018 Petar Petrov slackalaxy@gmail.com; 2018-2023 Rob van Nues sborg63.org # All rights reserved. # # Redistribution and use of this script, with or without modification, is @@ -26,8 +26,8 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=fastqc SRCNAM=FastQC -VERSION=${VERSION:-0.11.9} -SRCVER=${SRCVER:-v0.11.9} +VERSION=${VERSION:-0.12.1} +SRCVER=${SRCVER:-v0.12.1} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} @@ -37,7 +37,7 @@ ARCH=noarch # Jar files names and versions JBZIP=jbzip2-0.9.jar -SAM=sam-1.103.jar +HTS=htsjdk.jar CISD=cisd-jhdf5.jar # If the variable PRINT_PACKAGE_NAME is set, then this script will report what @@ -68,7 +68,7 @@ find -L . \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; install -D -m755 $PRGNAM $PKG/usr/share/java/$PRGNAM/$PRGNAM -cp -a Configuration net org Templates Help uk $JBZIP $SAM $CISD $PKG/usr/share/java/$PRGNAM +cp -a Configuration net org Templates Help uk $JBZIP $HTS $CISD $PKG/usr/share/java/$PRGNAM mkdir -p $PKG/usr/bin cd $PKG/usr/bin diff --git a/academic/fastqc/fastqc.info b/academic/fastqc/fastqc.info index 339e12ba48fa..f8a3a209aa62 100644 --- a/academic/fastqc/fastqc.info +++ b/academic/fastqc/fastqc.info @@ -1,10 +1,10 @@ PRGNAM="fastqc" -VERSION="0.11.9" +VERSION="0.12.1" HOMEPAGE="http://www.bioinformatics.babraham.ac.uk/projects/fastqc/" -DOWNLOAD="http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.9.zip" -MD5SUM="ee7901b681bb2762d75d5a56c7ec6958" +DOWNLOAD="http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.12.1.zip" +MD5SUM="a628c84cf19235d47fd979d4bb786a60" DOWNLOAD_x86_64="" MD5SUM_x86_64="" -REQUIRES="zulu-openjdk8" +REQUIRES="zulu-openjdk11" MAINTAINER="Rob van Nues" EMAIL="sborg63@disroot.org" |