diff options
| author | Petar Petrov <slackalaxy@gmail.com> | 2017-10-07 17:34:14 +0100 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2017-10-11 06:19:49 +0700 |
| commit | f3357334f4eae5f8f0e603a93f42f757d333e58f (patch) | |
| tree | 59e6f30eac1d01ec29a7ae9cc2c44c2761c2762c /academic | |
| parent | 1c218cb8d4f66951823c1f0d802cfdd5da29711b (diff) | |
academic/prank-msa: Updated for version 170427.
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
Diffstat (limited to 'academic')
| -rw-r--r-- | academic/prank-msa/README | 6 | ||||
| -rw-r--r-- | academic/prank-msa/prank-msa.SlackBuild | 2 | ||||
| -rw-r--r-- | academic/prank-msa/prank-msa.info | 6 |
3 files changed, 7 insertions, 7 deletions
diff --git a/academic/prank-msa/README b/academic/prank-msa/README index 4bc1a9f838f1a..03d714280f13c 100644 --- a/academic/prank-msa/README +++ b/academic/prank-msa/README @@ -3,15 +3,15 @@ PRANK: Probabilistic Alignment Kit PRANK is a probabilistic multiple alignment program for DNA, codon and amino-acid sequences. It is based on a novel algorithm that treats insertions correctly and avoids over-estimation of the number of -deletion events. +deletion events. In addition, PRANK borrows ideas from maximum likelihood (ML) methods used in phylogenetics and correctly takes into account the evolutionary -distances between sequences. +distances between sequences. Lastly, PRANK allows for defining a potential structure for sequences to be aligned and then, simultaneously with the alignment, predicts the -locations of structural units in the sequences. +locations of structural units in the sequences. NOTE! The dependencies listed in the REQUIRED field are not needed for diff --git a/academic/prank-msa/prank-msa.SlackBuild b/academic/prank-msa/prank-msa.SlackBuild index e1180665b527c..f9de0b7ec91ee 100644 --- a/academic/prank-msa/prank-msa.SlackBuild +++ b/academic/prank-msa/prank-msa.SlackBuild @@ -24,7 +24,7 @@ PRGNAM=prank-msa SRCNAM=prank.source -VERSION=${VERSION:-150803} +VERSION=${VERSION:-170427} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} diff --git a/academic/prank-msa/prank-msa.info b/academic/prank-msa/prank-msa.info index 2d999b1d23474..ab3041d52b35a 100644 --- a/academic/prank-msa/prank-msa.info +++ b/academic/prank-msa/prank-msa.info @@ -1,10 +1,10 @@ PRGNAM="prank-msa" -VERSION="150803" +VERSION="170427" HOMEPAGE="http://wasabiapp.org/software/prank/" DOWNLOAD="UNSUPPORTED" MD5SUM="" -DOWNLOAD_x86_64="http://wasabiapp.org/download/prank/prank.source.150803.tgz" -MD5SUM_x86_64="71ac2659e91c385c96473712c0a23e8a" +DOWNLOAD_x86_64="http://wasabiapp.org/download/prank/prank.source.170427.tgz" +MD5SUM_x86_64="a5cda14dc4e5efe1f14b84eb7a7caabd" REQUIRES="bppsuite mafft exonerate" MAINTAINER="Petar Petrov" EMAIL="slackalaxy@gmail.com" |