diff options
| author | Petar Petrov <slackalaxy@gmail.com> | 2022-09-05 16:54:07 +0100 |
|---|---|---|
| committer | Dave Woodfall <dave@slackbuilds.org> | 2022-09-08 08:11:03 +0100 |
| commit | 81927c36c58825e15ce3bb20f7c434be2da30d93 (patch) | |
| tree | a509e7af188a17321bcd3c1a7e2852328f8d8ce6 /academic/ugene/ugene.SlackBuild | |
| parent | 329edf7ded56c3a72fd3e8d0bfbb3e1bdb3f1e44 (diff) | |
academic/ugene: Updated for version 44.0.
Signed-off-by: Dave Woodfall <dave@slackbuilds.org>
Diffstat (limited to 'academic/ugene/ugene.SlackBuild')
| -rw-r--r-- | academic/ugene/ugene.SlackBuild | 45 |
1 files changed, 36 insertions, 9 deletions
diff --git a/academic/ugene/ugene.SlackBuild b/academic/ugene/ugene.SlackBuild index 6ccec594dd..1b758cca57 100644 --- a/academic/ugene/ugene.SlackBuild +++ b/academic/ugene/ugene.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for ugene -# Copyright 2013-2021 Petar Petrov slackalaxy@gmail.com +# Copyright 2013-2022 Petar Petrov slackalaxy@gmail.com # All rights reserved. # # Redistribution and use of this script, with or without modification, is @@ -25,8 +25,8 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=ugene -VERSION=${VERSION:-38.1} -BUILD=${BUILD:-2} +VERSION=${VERSION:-44.0} +BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} @@ -84,19 +84,46 @@ find -L . \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; # Fix libraries and man pages paths -sed -i "s:/lib:/lib${LIBDIRSUFFIX}:g" src/ugene_globals.pri -sed -i "s:/share/man:/man:g" src/ugene_globals.pri -sed -i "s:Werror=maybe-uninitialized:Wno-error=maybe-uninitialized:g - s:Werror=uninitialized:Wno-error=uninitialized:g" \ - src/ugene_globals.pri +#sed -i "s:/lib:/lib${LIBDIRSUFFIX}:g" src/ugene_globals.pri +#sed -i "s:/share/man:/man:g" src/ugene_globals.pri +#sed -i "s:Werror=maybe-uninitialized:Wno-error=maybe-uninitialized:g +# s:Werror=uninitialized:Wno-error=uninitialized:g" \ +# src/ugene_globals.pri -qmake-qt5 $QMAKECONFIG -r \ +qmake-qt5 $QMAKECONFIG -r PREFIX=/usr/lib${LIBDIRSUFFIX}/$PRGNAM \ QMAKE_CFLAGS="$SLKCFLAGS" \ QMAKE_CXXFLAGS="$SLKCFLAGS -std=c++11" \ UGENE_EXCLUDE_LIST_ENABLED=1 make + +# Apparently, this has to be done twice to generate the right installation files +# https://github.com/ugeneunipro/ugene/issues/683#issuecomment-1046370388 +qmake-qt5 $QMAKECONFIG -r PREFIX=/usr/lib${LIBDIRSUFFIX}/$PRGNAM \ +QMAKE_CFLAGS="$SLKCFLAGS" \ +QMAKE_CXXFLAGS="$SLKCFLAGS -std=c++11" \ +UGENE_EXCLUDE_LIST_ENABLED=1 +make + make install INSTALL_ROOT=$PKG +mkdir -p $PKG/usr/share/{applications,pixmaps} +mv $PKG/usr/lib${LIBDIRSUFFIX}/$PRGNAM/$PRGNAM.desktop $PKG/usr/share/applications +mv $PKG/usr/lib${LIBDIRSUFFIX}/$PRGNAM/$PRGNAM.png $PKG/usr/share/pixmaps + +mkdir -p $PKG/usr/man/man1 +mv $PKG/usr/lib${LIBDIRSUFFIX}/$PRGNAM/$PRGNAM.1.gz $PKG/usr/man/man1 + +mkdir -p $PKG/usr/bin +cd $PKG/usr/bin +ln -s ../lib${LIBDIRSUFFIX}/$PRGNAM/$PRGNAM . +cd - + +# Do not associate with my fasta files... +sed -i '/MimeType/d' $PKG/usr/share/applications/$PRGNAM.desktop + +# use just one categiry +sed -i "s:Education;Science:Education:" $PKG/usr/share/applications/$PRGNAM.desktop + find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \ | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true |