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| author | Rob van Nues <sborg63@disroot.org> | 2021-02-26 20:38:40 +0000 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2021-02-27 08:24:29 +0700 |
| commit | 4dedcbf30599730f3b6933223976af310a5dd55a (patch) | |
| tree | 8be545bb6a03003b62355e7dcdadd83691bffd27 /academic/pyCRAC/README | |
| parent | 70232465a0a5f3fc52c04b886d78e40b901a16d6 (diff) | |
academic/pyCRAC: Updated for version 1.5.0.
Signed-off-by: Dave Woodfall <dave@slackbuilds.org>
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/pyCRAC/README')
| -rw-r--r-- | academic/pyCRAC/README | 6 |
1 files changed, 1 insertions, 5 deletions
diff --git a/academic/pyCRAC/README b/academic/pyCRAC/README index 1583f3e62c7f0..9eb56fc04311f 100644 --- a/academic/pyCRAC/README +++ b/academic/pyCRAC/README @@ -8,8 +8,6 @@ and reports sense and anti-sense hits. Included is the pipeline used for the analysis of a group of CRAC data sets. -An R-function used for kinetic CRAC analysis can be found in -/usr/share/pyCRAC-$VERSION/kinetic_crac_pipeline References @@ -26,10 +24,9 @@ Granneman S. If you want to run the test suite after installation, see README.tests. + Note on the Crac pipelines: -The CRAC_pipeline_PE.py and CRAC_pipeline_SE.py scripts now ONLY work -with pyCRAC version 1.3.3 and Flexbar version 3.4.0 and later(!) Use the -h flag to get a detailed help menu. The CRAC_pipeline_PE.py script needs to be run from the folder that @@ -44,4 +41,3 @@ The file containing the adapter sequences should be in the fasta format. The chromosome_lengths file should contain two tab-separated columns in which the first column has the chromosome name and the second the chromosome length. - |