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authorPetar Petrov <slackalaxy@gmail.com>2016-11-26 22:56:13 +0000
committerWilly Sudiarto Raharjo <willysr@slackbuilds.org>2016-12-03 07:17:45 +0700
commit8b5da50bf5ed02c032e8b3ef77991932280fb291 (patch)
tree380b76754e9aa54dbcc40ceb48b36869888054c5 /academic/paml
parent8688ebd44229c9d8ea205b5ed3c3039c4964a62a (diff)
academic/paml: Updated for version 4.9c.
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
Diffstat (limited to 'academic/paml')
-rw-r--r--academic/paml/paml.SlackBuild12
-rw-r--r--academic/paml/paml.info6
-rw-r--r--academic/paml/slack-desc2
3 files changed, 10 insertions, 10 deletions
diff --git a/academic/paml/paml.SlackBuild b/academic/paml/paml.SlackBuild
index fd7499481ed39..091a998776cac 100644
--- a/academic/paml/paml.SlackBuild
+++ b/academic/paml/paml.SlackBuild
@@ -23,27 +23,27 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
PRGNAM=paml
-VERSION=${VERSION:-4.9a}
+VERSION=${VERSION:-4.9c}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
- i?86) ARCH=i486 ;;
+ i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
-MAINVER=4.9a
+MAINVER=4.9c
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
-if [ "$ARCH" = "i486" ]; then
- SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+if [ "$ARCH" = "i586" ]; then
+ SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
@@ -61,7 +61,7 @@ set -e
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
-rm -rf ${PRGNAM}${VERSION}
+rm -rf ${PRGNAM}${MAINVER}
tar xvf $CWD/${PRGNAM}${VERSION}.tgz
cd ${PRGNAM}${MAINVER}
chown -R root:root .
diff --git a/academic/paml/paml.info b/academic/paml/paml.info
index 164083571cc61..4a56326c0265b 100644
--- a/academic/paml/paml.info
+++ b/academic/paml/paml.info
@@ -1,9 +1,9 @@
PRGNAM="paml"
-VERSION="4.9a"
+VERSION="4.9c"
HOMEPAGE="http://abacus.gene.ucl.ac.uk/software/paml.html"
-DOWNLOAD="http://abacus.gene.ucl.ac.uk/software/paml4.9a.tgz \
+DOWNLOAD="http://abacus.gene.ucl.ac.uk/software/paml4.9c.tgz \
http://abacus.gene.ucl.ac.uk/software/MCMCtree.Tutorials.pdf"
-MD5SUM="e1c421f3642e2770949ddafcd17a7173 \
+MD5SUM="7c3638fdf19ec44b7b2636477d893de6 \
29c851d887eea56b949c01ab42cc48fb"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
diff --git a/academic/paml/slack-desc b/academic/paml/slack-desc
index 3c43e09ade2b2..595ae82bbae86 100644
--- a/academic/paml/slack-desc
+++ b/academic/paml/slack-desc
@@ -16,4 +16,4 @@ paml: reconstructed trees using other programs such as PAUP*, PHYLIP,
paml: MOLPHY, PhyML, RaxML, etc.
paml:
paml: Home: http://abacus.gene.ucl.ac.uk/software/paml.html
-paml: References: /usr/doc/paml-4.9a/References
+paml: References: /usr/doc/paml-4.9c/References