diff options
| author | Rob van Nues <rvnues at tesco {dot} net> | 2017-09-10 19:26:09 +0100 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2017-09-16 07:15:01 +0700 |
| commit | 14c13dd569ce25a3ae01ca4fe59f9c1cafe4c9e9 (patch) | |
| tree | 645db8fa41c17debcd118170c1aee9014dfcb2ee /academic/novocraft/doinst.sh | |
| parent | 87f60da8dead64a7e438ea4e1186807adb7c7212 (diff) | |
academic/novocraft: Added (map short reads onto reference genome).
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
Diffstat (limited to 'academic/novocraft/doinst.sh')
| -rw-r--r-- | academic/novocraft/doinst.sh | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/academic/novocraft/doinst.sh b/academic/novocraft/doinst.sh new file mode 100644 index 0000000000000..28a4a774c116c --- /dev/null +++ b/academic/novocraft/doinst.sh @@ -0,0 +1,26 @@ +config() { + NEW="$1" + OLD="$(dirname $NEW)/$(basename $NEW .new)" + # If there's no config file by that name, mv it over: + if [ ! -r $OLD ]; then + mv $NEW $OLD + elif [ "$(cat $OLD | md5sum)" = "$(cat $NEW | md5sum)" ]; then + # toss the redundant copy + rm $NEW + fi + # Otherwise, we leave the .new copy for the admin to consider... +} + +preserve_perms() { + NEW="$1" + OLD="$(dirname $NEW)/$(basename $NEW .new)" + if [ -e $OLD ]; then + cp -a $OLD ${NEW}.incoming + cat $NEW > ${NEW}.incoming + mv ${NEW}.incoming $NEW + fi + config $NEW +} + +preserve_perms etc/profile.d/novocraft.sh.new +preserve_perms etc/profile.d/novocraft.csh.new |