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authorMatteo Bernardini <ponce@slackbuilds.org>2022-02-07 15:36:49 +0100
committerWilly Sudiarto Raharjo <willysr@slackbuilds.org>2022-02-07 23:04:38 +0700
commit096ed059c39c9fee6ef8b2821091532cd31361e3 (patch)
tree3890d87a677fadf8710e9e63f2df8fcd3973fa2a /academic/mkDSSP
parentbf8cac8e5def1376afa53fa1eb56c06f9f65217e (diff)
academic/mkDSSP: Updated for version 4.0.3, switch to cmake.
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/mkDSSP')
-rw-r--r--academic/mkDSSP/mkDSSP.SlackBuild40
-rw-r--r--academic/mkDSSP/mkDSSP.info6
2 files changed, 24 insertions, 22 deletions
diff --git a/academic/mkDSSP/mkDSSP.SlackBuild b/academic/mkDSSP/mkDSSP.SlackBuild
index 66793c86d72d8..d5461df266020 100644
--- a/academic/mkDSSP/mkDSSP.SlackBuild
+++ b/academic/mkDSSP/mkDSSP.SlackBuild
@@ -25,13 +25,12 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=mkDSSP
-VERSION=${VERSION:-4.0_git6338c83}
+VERSION=${VERSION:-4.0.3}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
SRCNAM=dssp
-COMMIT="6338c836b631e87fc03bd147ec67d27ea72f6f70"
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
@@ -72,9 +71,9 @@ set -e
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
-rm -rf $SRCNAM-$COMMIT
-tar xvf $CWD/$SRCNAM-$COMMIT.tar.gz
-cd $SRCNAM-$COMMIT
+rm -rf $SRCNAM-$VERSION
+tar xvf $CWD/$SRCNAM-$VERSION.tar.gz
+cd $SRCNAM-$VERSION
chown -R root:root .
find -L . \
\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
@@ -82,20 +81,20 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
-CFLAGS="$SLKCFLAGS" \
-CXXFLAGS="$SLKCFLAGS" \
-./configure \
- --prefix=/usr \
- --libdir=/usr/lib${LIBDIRSUFFIX} \
- --sysconfdir=/etc \
- --localstatedir=/var \
- --disable-revision \
- --mandir=/usr/man \
- --docdir=/usr/doc/$PRGNAM-$VERSION \
- --build=$ARCH-slackware-linux
-
-make
-make install DESTDIR=$PKG mandir=$PKG/usr/man
+sed -i "s|CMAKE_INSTALL_DATADIR}/man|CMAKE_INSTALL_PREFIX}/man|" CMakeLists.txt
+
+mkdir -p build
+cd build
+ cmake \
+ -DCMAKE_C_FLAGS:STRING="$SLKCFLAGS" \
+ -DCMAKE_CXX_FLAGS:STRING="$SLKCFLAGS" \
+ -DCMAKE_INSTALL_PREFIX=/usr \
+ -DLIB_SUFFIX=${LIBDIRSUFFIX} \
+ -DBUILD_SHARED_LIBS=ON \
+ -DCMAKE_BUILD_TYPE=Release ..
+ make
+ make install DESTDIR=$PKG
+cd ..
# Some programs (like aline) expect the binary to be called just "dssp"
cd $PKG/usr/bin
@@ -105,6 +104,9 @@ cd -
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
+find $PKG/usr/man -type f -exec gzip -9 {} \;
+for i in $( find $PKG/usr/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done
+
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
cp -a \
LICENSE README.md \
diff --git a/academic/mkDSSP/mkDSSP.info b/academic/mkDSSP/mkDSSP.info
index 43a6d3a2245d4..494233066f1a0 100644
--- a/academic/mkDSSP/mkDSSP.info
+++ b/academic/mkDSSP/mkDSSP.info
@@ -1,8 +1,8 @@
PRGNAM="mkDSSP"
-VERSION="4.0_git6338c83"
+VERSION="4.0.3"
HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/DSSP_3.html"
-DOWNLOAD="https://github.com/PDB-REDO/dssp/archive/6338c83/dssp-6338c836b631e87fc03bd147ec67d27ea72f6f70.tar.gz"
-MD5SUM="c4616197bb510c36f1c4dcce018e870d"
+DOWNLOAD="https://github.com/PDB-REDO/dssp/archive/v4.0.3/dssp-4.0.3.tar.gz"
+MD5SUM="fac80f6b2ca0120c414510b420dc5b6a"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="libcifpp"