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| author | Petar Petrov <slackalaxy@gmail.com> | 2018-12-25 05:33:47 +0700 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2018-12-25 05:33:47 +0700 |
| commit | 207b4e9661bf668016f39ea136933bdb6f24c017 (patch) | |
| tree | 9fef92942a5bbdd696f7b88ee859b8539c77fa70 /academic/jellyfish_k-mer/slack-desc | |
| parent | e7afd86aaf7adf5f8cab4fb8184cd77b74bf7c60 (diff) | |
academic/jellyfish_k-mer: Added (k-mers counting tools).
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/jellyfish_k-mer/slack-desc')
| -rw-r--r-- | academic/jellyfish_k-mer/slack-desc | 19 |
1 files changed, 19 insertions, 0 deletions
diff --git a/academic/jellyfish_k-mer/slack-desc b/academic/jellyfish_k-mer/slack-desc new file mode 100644 index 0000000000..c5be86dd58 --- /dev/null +++ b/academic/jellyfish_k-mer/slack-desc @@ -0,0 +1,19 @@ +# HOW TO EDIT THIS FILE: +# The "handy ruler" below makes it easier to edit a package description. +# Line up the first '|' above the ':' following the base package name, and +# the '|' on the right side marks the last column you can put a character in. +# You must make exactly 11 lines for the formatting to be correct. It's also +# customary to leave one space after the ':' except on otherwise blank lines. + + |-----handy-ruler------------------------------------------------------| +jellyfish_k-mer: jellyfish_k-mer (A tool for counting of k-mers in DNA) +jellyfish_k-mer: +jellyfish_k-mer: Jellyfish is a tool for fast, memory-efficient counting of k-mers +jellyfish_k-mer: in DNA. A k-mer is a substring of length k, and counting the +jellyfish_k-mer: occurrences of all such substrings is a central step in many +jellyfish_k-mer: analyses of DNA sequence. Jellyfish can count k-mers quickly by +jellyfish_k-mer: using an efficient encoding of a hash table and by exploiting the +jellyfish_k-mer: "compare-and-swap" CPU instruction to increase parallelism. +jellyfish_k-mer: +jellyfish_k-mer: Home: http://www.genome.umd.edu/jellyfish.html +jellyfish_k-mer: |