diff options
| author | Petar Petrov <slackalaxy@gmail.com> | 2023-05-12 00:55:54 +0100 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2023-05-13 19:27:12 +0700 |
| commit | 26da2395a38cc0e6df8c2722a8d97623d9c2eb07 (patch) | |
| tree | 585ed0c716a6d3bb4fc53b2b4813443c4f30a6bd /academic/hyphy | |
| parent | 0679e8345c8339829664efaad481962f48bae02b (diff) | |
academic/hyphy: Updated for version 2.5.50.
Signed-off-by: bedlam <dave@slackbuilds.org>
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/hyphy')
| -rw-r--r-- | academic/hyphy/README | 4 | ||||
| -rw-r--r-- | academic/hyphy/hyphy.SlackBuild | 7 | ||||
| -rw-r--r-- | academic/hyphy/hyphy.info | 6 |
3 files changed, 9 insertions, 8 deletions
diff --git a/academic/hyphy/README b/academic/hyphy/README index 4405702da107c..2aca901dffba4 100644 --- a/academic/hyphy/README +++ b/academic/hyphy/README @@ -51,6 +51,10 @@ NOTE! The script builds two executables: HYPHYMP, which uses pthreads to do multiprocessing and HYPHYMPI, which uses openmpi (hence the dependency). +HyPhy Vision +To visualise your results produced offline, you can use HyPhy Vision: +http://vision.hyphy.org/ + Citing Sergei L. Kosakovsky Pond, Simon D. W. Frost and Spencer V. Muse (2005) HyPhy: hypothesis testing using phylogenies. diff --git a/academic/hyphy/hyphy.SlackBuild b/academic/hyphy/hyphy.SlackBuild index 42a522f74b604..aa4484c23900b 100644 --- a/academic/hyphy/hyphy.SlackBuild +++ b/academic/hyphy/hyphy.SlackBuild @@ -25,7 +25,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=hyphy -VERSION=${VERSION:-2.5.49} +VERSION=${VERSION:-2.5.50} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} @@ -100,10 +100,7 @@ cd build -DCMAKE_INSTALL_PREFIX=/usr \ -DCMAKE_BUILD_TYPE=Release .. -# It is actually not necessary anymore to specify here MP and HYPHYMPI, -# as 'make' alone will attempt to build them both. However, let's leave -# them, just in case. - make MP HYPHYMPI + make HYPHYMPI make install DESTDIR=$PKG cd .. diff --git a/academic/hyphy/hyphy.info b/academic/hyphy/hyphy.info index a9492a99cb21f..b35f93b3bb3a2 100644 --- a/academic/hyphy/hyphy.info +++ b/academic/hyphy/hyphy.info @@ -1,8 +1,8 @@ PRGNAM="hyphy" -VERSION="2.5.49" +VERSION="2.5.50" HOMEPAGE="https://veg.github.io/hyphy-site/" -DOWNLOAD="https://github.com/veg/hyphy/archive/2.5.49/hyphy-2.5.49.tar.gz" -MD5SUM="cdb9283d628d0cd9baddaa89072839c1" +DOWNLOAD="https://github.com/veg/hyphy/archive/2.5.50/hyphy-2.5.50.tar.gz" +MD5SUM="c4e02d58025f4d1f129cc2b0c2dc97dd" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="openmpi" |