academic/bcftools: Updated for version 1.10.2.

Signed-off-by: Robby Workman <rworkman@slackbuilds.org>

4 files changed, 20 insertions, 17 deletions

diff --git a/academic/bcftools/README b/academic/bcftools/README
index 731b912643d07..aef002668d7e9 100644
--- a/academic/bcftools/README
+++ b/academic/bcftools/README
@@ -1,5 +1,9 @@
-Prior to the introduction of HTSlib, SAMtools and BCFtools were distributed in
-a single samtools-0.1.x package.
-This old version remains available from SBo as samtools-legacy
+bcftools (BCF calling tools) contains all the "vcf..." commands which 
+previously lived in the htslib repository (such as vcfcheck, vcfmerge,
+vcfisec, etc.) and the samtools BCF calling from bcftools subdirectory 
+of the previous samtools. BCFtools are meant as a faster replacement 
+for most of the perl VCFtools commands.
 
-The BCFtools is now distributed as an individual package.
+Prior to the introduction of HTSlib, SAMtools and BCFtools were distributed 
+in a single samtools-0.1.x package. This old version remains available from 
+SBo as samtools-legacy.
diff --git a/academic/bcftools/bcftools.SlackBuild b/academic/bcftools/bcftools.SlackBuild
index 5607ba9d9a234..52bd419da0def 100644
--- a/academic/bcftools/bcftools.SlackBuild
+++ b/academic/bcftools/bcftools.SlackBuild
@@ -2,7 +2,7 @@
 
 # Slackware build script for samtools
 
-# Copyright 2017-2018 Rob van Nues # All rights reserved.
+# Copyright 2017-2020 Rob van Nues # All rights reserved.
 #
 # Redistribution and use of this script, with or without modification, is
 # permitted provided that the following conditions are met:
@@ -23,7 +23,7 @@
 
 
 PRGNAM=bcftools		
-VERSION=${VERSION:-1.9}
+VERSION=${VERSION:-1.10.2}
 BUILD=${BUILD:-1}
 TAG=${TAG:-_SBo}	
 
@@ -69,7 +69,7 @@ find -L . \
  \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
   -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
 
-#force linking to installed htslib
+# Force linking to installed htslib
 rm -r htslib-$VERSION
 
 CFLAGS="$SLKCFLAGS" \
@@ -90,7 +90,6 @@ CXXFLAGS="$SLKCFLAGS" \
   --build=$ARCH-slackware-linux
 
 make
-#make test
 make install DESTDIR=$PKG
 
 find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
diff --git a/academic/bcftools/bcftools.info b/academic/bcftools/bcftools.info
index 12d206a836de7..b8201d734dc99 100644
--- a/academic/bcftools/bcftools.info
+++ b/academic/bcftools/bcftools.info
@@ -1,8 +1,8 @@
 PRGNAM="bcftools"
-VERSION="1.9"
+VERSION="1.10.2"
 HOMEPAGE="http://www.htslib.org"
-DOWNLOAD="https://github.com/samtools/bcftools/releases/download/1.9/bcftools-1.9.tar.bz2"
-MD5SUM="c8fb7bb9c9251342b0ecf1e6f0c98335"
+DOWNLOAD="https://github.com/samtools/bcftools/releases/download/1.10.2/bcftools-1.10.2.tar.bz2"
+MD5SUM="081ebb6138f5fdf394cb6a074effadb3"
 DOWNLOAD_x86_64=""
 MD5SUM_x86_64=""
 REQUIRES="htslib"
diff --git a/academic/bcftools/slack-desc b/academic/bcftools/slack-desc
index a5f72be8ed96f..2f85ffb7dd89a 100644
--- a/academic/bcftools/slack-desc
+++ b/academic/bcftools/slack-desc
@@ -8,12 +8,12 @@
         |-----handy-ruler------------------------------------------------------|
 bcftools: bcftools (BCF calling tools)
 bcftools:
-bcftools: bcftools contains all the "vcf..." commands which previously lived in 
-bcftools: the htslib repository (such as vcfcheck, vcfmerge, vcfisec, etc.) and 
-bcftools: the samtools BCF calling from bcftools subdirectory of the previous 
-bcftools: samtools. BCFtools are meant as a faster replacement for most of the 
+bcftools: bcftools contains all the "vcf..." commands which previously lived in
+bcftools: the htslib repository (such as vcfcheck, vcfmerge, vcfisec, etc.) and
+bcftools: the samtools BCF calling from bcftools subdirectory of the previous
+bcftools: samtools. BCFtools are meant as a faster replacement for most of the
 bcftools: perl VCFtools commands. Bcftools comes with its own hstlib sources.
 bcftools:
-bcftools: Home: http://www.htslib.org
-bcftools: 
+bcftools: Homepage: http://www.htslib.org
+bcftools:
 bcftools: