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| author | Petar Petrov <slackalaxy@gmail.com> | 2020-09-15 08:26:50 +0700 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2020-09-15 08:26:50 +0700 |
| commit | 789435221bf74332c4b3a54f50e170845bb97ec6 (patch) | |
| tree | b26a098cd00d06c057ac4add2f2482ecdbbe047b /academic/PhyML/PhyML.SlackBuild | |
| parent | e8ca977a323bf506083d2bcda48079b6534742e5 (diff) | |
academic/PhyMLR: Updated for version 3.3.20200621.
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/PhyML/PhyML.SlackBuild')
| -rw-r--r-- | academic/PhyML/PhyML.SlackBuild | 12 |
1 files changed, 7 insertions, 5 deletions
diff --git a/academic/PhyML/PhyML.SlackBuild b/academic/PhyML/PhyML.SlackBuild index bddb063c007bf..893454e123e5c 100644 --- a/academic/PhyML/PhyML.SlackBuild +++ b/academic/PhyML/PhyML.SlackBuild @@ -25,7 +25,7 @@ # Thanks to Niels Horn for some handy modifications and corrections. PRGNAM=PhyML -VERSION=${VERSION:-3.3.20190909} +VERSION=${VERSION:-3.3.20200621} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} @@ -89,7 +89,9 @@ find -L . \ # Use our CFLAGS sed -i "/^CFLAGS/s/=/+=/" Makefile src/Makefile -CFLAGS="$SLKCFLAGS" CXXFLAGS="$SLKCFLAGS" make +# The -mfma flag is needed for building on 14.2. Help is from here: +# https://github.com/horovod/horovod/issues/1832 +CFLAGS="$SLKCFLAGS -mfma" CXXFLAGS="$SLKCFLAGS -mfma" make make install DESTDIR=$PKG # This is PhyML MPI. If you do not want it, comment the lines below. Then you do @@ -108,7 +110,7 @@ make install DESTDIR=$PKG # Use our CFLAGS sed -i "/^CFLAGS/s/=/+=/" Makefile src/Makefile -CFLAGS="$SLKCFLAGS" CXXFLAGS="$SLKCFLAGS" make +CFLAGS="$SLKCFLAGS -mfma" CXXFLAGS="$SLKCFLAGS -mfma" make make install DESTDIR=$PKG # This is Phyrex @@ -126,7 +128,7 @@ make install DESTDIR=$PKG # Use our CFLAGS sed -i "/^CFLAGS/s/=/+=/" Makefile src/Makefile -CFLAGS="$SLKCFLAGS" CXXFLAGS="$SLKCFLAGS" make +CFLAGS="$SLKCFLAGS -mfma" CXXFLAGS="$SLKCFLAGS -mfma" make make install DESTDIR=$PKG # This is PhyTime @@ -144,7 +146,7 @@ make install DESTDIR=$PKG # Use our CFLAGS sed -i "/^CFLAGS/s/=/+=/" Makefile src/Makefile -CFLAGS="$SLKCFLAGS" CXXFLAGS="$SLKCFLAGS" make +CFLAGS="$SLKCFLAGS -mfma" CXXFLAGS="$SLKCFLAGS -mfma" make make install DESTDIR=$PKG find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \ |