diff options
| author | Pedro Mendes <pedro@gepasi.org> | 2023-01-31 20:51:43 +0000 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2023-02-04 07:19:52 +0700 |
| commit | 270ea97f6e7588778c9bb0f83db37e24de676e81 (patch) | |
| tree | d80b948350f683caccf582ff8bb94d107a0e686f | |
| parent | f9200046b559ef97c67fc22287b4f74f043e9454 (diff) | |
academic/copasi: Updated for version 4.39.272.
Signed-off-by: bedlam <dave@slackbuilds.org>
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
| -rw-r--r-- | academic/copasi/README | 24 | ||||
| -rw-r--r-- | academic/copasi/copasi.SlackBuild | 2 | ||||
| -rw-r--r-- | academic/copasi/copasi.info | 10 |
3 files changed, 18 insertions, 18 deletions
diff --git a/academic/copasi/README b/academic/copasi/README index c640a01c87b1..1ebe37a34db9 100644 --- a/academic/copasi/README +++ b/academic/copasi/README @@ -1,17 +1,17 @@ -COPASI is a package for modeling and simulation of biochemical networks, -popular in the field of systems biology. +COPASI is a package for modeling and simulation of chemical reaction +networks and other dynamical systems. -COPASI is a stand-alone program that simulates models of biochemical -networks using ODE solvers or Gillespie's stochastic simulation -algorithm. COPASI is compatible with models in SBML format. It also -performs several analyses, such as steady state, stability, parameter -sensitivity, elementary modes, Lyapunov exponents, optimization, and -parameter estimation. Data can be visualized in plots, histograms and -animations of network diagrams. COPASI's GUI is based on QT, but a -command line version is also included that allows for processing -computations in batch mode. +COPASI is a stand-alone program that simulates models of chemical +reaction networks using ODE/SDE solvers or Gillespie's stochastic +simulation algorithm. COPASI is compatible with models in SBML format. +It also performs several analyses, such as steady state, stability, +parameter sensitivity, elementary modes, Lyapunov exponents, +optimization, and parameter estimation. Data can be visualized in +plots, histograms and animations of network diagrams. COPASI's GUI is +based on QT, but a command line version is also included that allows +for processing computations in batch mode. COPASI is a collaboration between research groups at the Biocomplexity -Institute and Initiative at University of Virginia, University of +Institute and Initiative at University of Virginia, University of Heidelberg, University of Connecticut, and previously the University of Manchester, Virginia Tech, and the EML-Research. diff --git a/academic/copasi/copasi.SlackBuild b/academic/copasi/copasi.SlackBuild index 1f4f32d4f341..c6222c7c9484 100644 --- a/academic/copasi/copasi.SlackBuild +++ b/academic/copasi/copasi.SlackBuild @@ -25,7 +25,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=copasi -VERSION=${VERSION:-4.38.268} +VERSION=${VERSION:-4.39.272} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} diff --git a/academic/copasi/copasi.info b/academic/copasi/copasi.info index 01d1d3610a3a..ce8340147983 100644 --- a/academic/copasi/copasi.info +++ b/academic/copasi/copasi.info @@ -1,10 +1,10 @@ PRGNAM="copasi" -VERSION="4.38.268" +VERSION="4.39.272" HOMEPAGE="https://copasi.org" -DOWNLOAD="https://github.com/copasi/COPASI/releases/download/Build-268/COPASI-4.38.268-Linux-32bit.sh" -MD5SUM="7d60ce40a1be7b17a8264ab579450a20" -DOWNLOAD_x86_64="https://github.com/copasi/COPASI/releases/download/Build-268/COPASI-4.38.268-Linux-64bit.sh" -MD5SUM_x86_64="d364f79f08e25739d8e60a25209d2e08" +DOWNLOAD="https://github.com/copasi/COPASI/releases/download/Build-272/COPASI-4.39.272-Linux-32bit.sh" +MD5SUM="ff6455e42fbeafe86dbe4607f8fbcaca" +DOWNLOAD_x86_64="https://github.com/copasi/COPASI/releases/download/Build-272/COPASI-4.39.272-Linux-64bit.sh" +MD5SUM_x86_64="ac334d6e798b3ea969ef09b77132629d" REQUIRES="" MAINTAINER="Pedro Mendes" EMAIL="pedro@gepasi.org" |