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2013-12-14academic/cistrome-MACS: Added (Model-based Analysis of ChIP-Seq).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/cistrome-CEAS: Added (Cis-regulatory Element Annotation).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/EMBASSY: Updated for version 6.6.0.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/EMBOSS: Updated for version 6.6.0.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/vcftools: Added (A program designed for working with VCF).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/ugene: Updated for version 1.13.0.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/tophat: Added (Splice junction mapper for RNA-Seq reads).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/topdraw: Added (A sketchpad for protein topology diagrams).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/tabix: Added (Generic indexer).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/t_coffee: Updated for version 10.00.r1613.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/primer3: Updated for version 2.3.6.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/pamlX: Added (A GUI for PAML).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/paml: Added (Phylogenetic Analysis by Maximum Likelihood).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/mrbayes: Updated for version 3.2.2.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/mkDSSP: Updated for version 2.2.1.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/mafft: Updated for version 7.130.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/cufflinks: Added (reference-guided assembler for RNA-Seq).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/samtools: Added (Sequence Alignment/Map Tools).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/bowtie2: Added (A tool for aligning sequencing reads).Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/bowtie: Updated for version 1.0.0.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/PhyML: Updated for version 20131112.Petar Petrov
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14academic/geoserver-pyramid: Added (pyramid data store support)Benjamin Trigona-Harany
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
2013-12-14academic/geoserver-control-flow: Added (request rate limitation)Benjamin Trigona-Harany
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
2013-12-05academic/geogit: Updated for version 0.6.0.Benjamin Trigona-Harany
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-02academic/OWSLib: Added (OGC Web Service utility library)Benjamin Trigona-Harany
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-12-02academic/pointcloud: Added (PostgreSQL extension for storing LiDAR data)Benjamin Trigona-Harany
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-12-02academic/pdal: Added (point data abstraction library)Benjamin Trigona-Harany
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-12-02academic/Fiona: Added (Python interface for OGR)Benjamin Trigona-Harany
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-12-02academic/Shapely: Added (geometric objects, predicates, and operations in ↵Benjamin Trigona-Harany
Python) Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-12-02academic/osm2pgrouting: Added (import OSM data into pgRouting database)Benjamin Trigona-Harany
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-12-02academic/geoserver-wps: Added (WPS support for GeoServer)Benjamin Trigona-Harany
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-12-02academic/geoserver-css: Added (CSS styling support for GeoServer)Benjamin Trigona-Harany
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-12-02academic/geoserver: Added (geospatial server)Benjamin Trigona-Harany
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-12-02academic/pyproj: Added (Python interface to the PROJ.4 library)Benjamin Trigona-Harany
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-11-30academic/convertall: Fixed file ending with no newline.dsomero
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
2013-11-25various: Replace chmod command with find command from template.Heinz Wiesinger
Signed-off-by: Heinz Wiesinger <pprkut@slackbuilds.org>
2013-11-24academic/grass: Fix some bashisms.dsomero
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
2013-11-25academic/qtoctave: Update Email for Mauro GiacheroWilly Sudiarto Raharjo
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-11-24academic/GMT: Removed (no SBo maintainer)Robby Workman
Nothing else in the repo needs this, so there's not any good reason for us to continue carrying it. Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-11-24academic/engauge: Removed (build failure)Robby Workman
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-11-23various: Set hashbang line as /bin/sh.dsomero
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
2013-11-22various: Update find command to match template.dsomero
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
2013-11-22various: Fix SlackBuild formatting and comment nit picks.dsomero
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
2013-11-22various: Fix slack-desc formatting and comment nit picks.dsomero
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
2013-11-22various: Fix info formatting.dsomero
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
2013-11-22academic/mpqc: Removed (abandoned by SBo maintainer)Daniil Bratashov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-11-22academic/mopac7: Removed (abandoned by SBo maintainer)Daniil Bratashov
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
2013-11-21academic/xephem: Forced to use -j1.David Spencer
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-11-21academic/verilog: Forced to use -j1.David Spencer
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-11-21academic/units: Forced to use -j1.David Spencer
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>