academic/metis: Added (matrix ordering)

Signed-off-by: dsomero <xgizzmo@slackbuilds.org>

5 files changed, 302 insertions, 0 deletions

diff --git a/academic/metis/README b/academic/metis/README
new file mode 100644
index 0000000000000..24efe71728840
--- /dev/null
+++ b/academic/metis/README
@@ -0,0 +1,3 @@
+METIS is a set of serial programs for partitioning graphs, partitioning
+finite element meshes, and producing fill reducing orderings for sparse
+matrices.
diff --git a/academic/metis/autotoolize.diff b/academic/metis/autotoolize.diff
new file mode 100644
index 0000000000000..e9f868669562b
--- /dev/null
+++ b/academic/metis/autotoolize.diff
@@ -0,0 +1,188 @@
+diff --git a/Doc/Makefile.am b/Doc/Makefile.am
+new file mode 100644
+--- /dev/null
++++ b/Doc/Makefile.am
+@@ -0,0 +1,5 @@
++dist_noinst_DATA = manual.ps
++pdf_DATA = manual.pdf
++
++%.pdf: %.ps
++	ps2pdf $<
+diff --git a/Graphs/Makefile.am b/Graphs/Makefile.am
+new file mode 100644
+--- /dev/null
++++ b/Graphs/Makefile.am
+@@ -0,0 +1,2 @@
++EXTRA_DIST = 0README
++dist_noinst_DATA = 4elt.graph metis.mesh test.mgraph
+diff --git a/Lib/Makefile.am b/Lib/Makefile.am
+new file mode 100644
+--- /dev/null
++++ b/Lib/Makefile.am
+@@ -0,0 +1,61 @@
++pkgincludedir = $(includedir)/metis
++pkginclude_HEADERS = defs.h macros.h metis.h proto.h rename.h struct.h
++
++SRC = \
++	balance.c \
++	bucketsort.c \
++	ccgraph.c \
++	coarsen.c \
++	compress.c \
++	debug.c \
++	estmem.c \
++	fm.c \
++	fortran.c \
++	frename.c \
++	graph.c \
++	initpart.c \
++	kmetis.c \
++	kvmetis.c \
++	kwayfm.c \
++	kwayrefine.c \
++	kwayvolfm.c \
++	kwayvolrefine.c \
++	match.c \
++	mbalance.c \
++	mbalance2.c \
++	mcoarsen.c \
++	memory.c \
++	mesh.c \
++	meshpart.c \
++	mfm.c \
++	mfm2.c \
++	mincover.c \
++	minitpart.c \
++	minitpart2.c \
++	mkmetis.c \
++	mkwayfmh.c \
++	mkwayrefine.c \
++	mmatch.c \
++	mmd.c \
++	mpmetis.c \
++	mrefine.c \
++	mrefine2.c \
++	mutil.c \
++	myqsort.c \
++	ometis.c \
++	parmetis.c \
++	pmetis.c \
++	pqueue.c \
++	refine.c \
++	separator.c \
++	sfm.c \
++	srefine.c \
++	stat.c \
++	subdomains.c \
++	timing.c \
++	util.c
++
++lib_LTLIBRARIES = libmetis.la
++libmetis_la_SOURCES = $(SRC)
++libmetis_la_LIBADD = -lm
++libmetis_la_LDFLAGS = -no-undefined -version-info 4:1:0
+diff --git a/Makefile.am b/Makefile.am
+new file mode 100644
+--- /dev/null
++++ b/Makefile.am
+@@ -0,0 +1,5 @@
++SUBDIRS = Lib Programs Graphs Test Doc
++EXTRA_DIST = CHANGES FILES INSTALL VERSION metis.pc.in
++
++pkgconfigdir = $(libdir)/pkgconfig
++pkgconfig_DATA = metis.pc
+diff --git a/Programs/Makefile.am b/Programs/Makefile.am
+new file mode 100644
+--- /dev/null
++++ b/Programs/Makefile.am
+@@ -0,0 +1,23 @@
++AM_CPPFLAGS = -I$(top_srcdir)/Lib
++LDADD = $(top_builddir)/Lib/libmetis.la
++
++bin_PROGRAMS = \
++	pmetis \
++	kmetis \
++	oemetis \
++	onmetis \
++	mesh2dual \
++	mesh2nodal \
++	partdmesh \
++	partnmesh \
++	graphchk
++
++pmetis_SOURCES = pmetis.c io.c
++kmetis_SOURCES = kmetis.c io.c
++oemetis_SOURCES = oemetis.c io.c smbfactor.c
++onmetis_SOURCES = onmetis.c io.c smbfactor.c
++mesh2dual_SOURCES = mesh2dual.c io.c
++mesh2nodal_SOURCES = mesh2nodal.c io.c
++partdmesh_SOURCES = partdmesh.c io.c
++partnmesh_SOURCES = partnmesh.c io.c
++graphchk_SOURCES = graphchk.c io.c
+diff --git a/Test/Makefile.am b/Test/Makefile.am
+new file mode 100644
+--- /dev/null
++++ b/Test/Makefile.am
+@@ -0,0 +1,11 @@
++AM_CPPFLAGS = -I$(top_srcdir)/Lib
++LDADD = $(top_builddir)/Lib/libmetis.la
++
++check_PROGRAMS = mtest
++mtest_SOURCES = mtest.c ../Programs/io.c
++
++GRAPHS = \
++	../Graphs/4elt.graph
++
++check-local: $(check_PROGRAMS) $(GRAPHS)
++	-./mtest ../Graphs/4elt.graph
+diff --git a/configure.ac b/configure.ac
+new file mode 100644
+--- /dev/null
++++ b/configure.ac
+@@ -0,0 +1,31 @@
++AC_PREREQ([2.65])
++AC_INIT([METIS], [4.0.1], [karypis@cs.umn.edu])
++AC_CONFIG_SRCDIR([Lib/metis.h])
++AC_CONFIG_HEADER([config.h])
++AM_INIT_AUTOMAKE([foreign])
++LT_INIT
++
++AC_PROG_INSTALL
++AC_PROG_CC
++
++LIBS_SAVED=$LIBS
++
++AC_CHECK_LIB([m], [sqrt])
++
++AC_CHECK_HEADERS([malloc.h stdlib.h string.h strings.h])
++
++AC_FUNC_MALLOC
++AC_FUNC_REALLOC
++AC_CHECK_FUNCS([pow sqrt strtol])
++
++LIBS=$LIBS_SAVED
++
++AC_CONFIG_FILES([
++	Makefile
++	metis.pc
++	Doc/Makefile
++	Graphs/Makefile
++	Lib/Makefile
++	Programs/Makefile
++	Test/Makefile])
++AC_OUTPUT
+diff --git a/metis.pc.in b/metis.pc.in
+new file mode 100644
+--- /dev/null
++++ b/metis.pc.in
+@@ -0,0 +1,10 @@
++prefix=@prefix@
++exec_prefix=@exec_prefix@
++libdir=@libdir@
++includedir=@includedir@
++
++Name: @PACKAGE_NAME@
++Description: Software for partitioning unstructured graphs and meshes
++Version: @PACKAGE_VERSION@
++Libs: -L${libdir} -lmetis
++Cflags: -I${includedir}/metis
diff --git a/academic/metis/metis.SlackBuild b/academic/metis/metis.SlackBuild
new file mode 100644
index 0000000000000..5416295ed93ce
--- /dev/null
+++ b/academic/metis/metis.SlackBuild
@@ -0,0 +1,82 @@
+#!/bin/sh
+
+# Slackware build script for METIS
+# Written by Kyle Guinn <elyk03@gmail.com>
+
+PRGNAM=metis
+VERSION=${VERSION:-4.0.1}
+SRCVERSION=${SRCVERSION:-4.0}
+BUILD=${BUILD:-1}
+TAG=${TAG:-_SBo}
+
+if [ -z "$ARCH" ]; then
+  case "$(uname -m)" in
+    i?86) ARCH=i486 ;;
+    arm*) ARCH=arm ;;
+       *) ARCH=$(uname -m) ;;
+  esac
+fi
+
+CWD=$(pwd)
+TMP=${TMP:-/tmp/SBo}
+PKG=$TMP/package-$PRGNAM
+OUTPUT=${OUTPUT:-/tmp}
+
+DOCS="CHANGES FILES INSTALL VERSION"
+
+if [ "$ARCH" = "i486" ]; then
+  SLKCFLAGS="-O2 -march=i486 -mtune=i686"
+  LIBDIRSUFFIX=""
+elif [ "$ARCH" = "i686" ]; then
+  SLKCFLAGS="-O2 -march=i686 -mtune=i686"
+  LIBDIRSUFFIX=""
+elif [ "$ARCH" = "x86_64" ]; then
+  SLKCFLAGS="-O2 -fPIC"
+  LIBDIRSUFFIX="64"
+else
+  SLKCFLAGS="-O2"
+  LIBDIRSUFFIX=""
+fi
+
+set -e
+
+rm -rf $PKG
+mkdir -p $TMP $PKG $OUTPUT
+cd $TMP
+rm -rf $PRGNAM-$SRCVERSION
+tar xvf $CWD/$PRGNAM-$SRCVERSION.tar.gz
+cd $PRGNAM-$SRCVERSION
+chown -R root:root .
+chmod -R u+w,go+r-w,a-st .
+
+# The C standard reserves all names that begin with underscores.  Metis
+# ignores this and now we have naming conflicts with glibc.  Right now only
+# __log2 conflicts, but this should fix the problem for good.
+sed -i 's/__/metis__/g' Lib/rename.h
+
+patch -p1 < $CWD/autotoolize.diff
+autoreconf -vif
+
+CFLAGS="$SLKCFLAGS" \
+CXXFLAGS="$SLKCFLAGS" \
+./configure \
+  --prefix=/usr \
+  --libdir=/usr/lib${LIBDIRSUFFIX} \
+  --sysconfdir=/etc \
+  --localstatedir=/var \
+  --mandir=/usr/man \
+  --docdir=/usr/doc/$PRGNAM-$VERSION \
+  --build=$ARCH-slackware-linux
+
+make
+make install-strip DESTDIR=$PKG
+
+mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
+cp -a $DOCS $PKG/usr/doc/$PRGNAM-$VERSION
+cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
+
+mkdir -p $PKG/install
+cat $CWD/slack-desc > $PKG/install/slack-desc
+
+cd $PKG
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
diff --git a/academic/metis/metis.info b/academic/metis/metis.info
new file mode 100644
index 0000000000000..7d976ba7b234f
--- /dev/null
+++ b/academic/metis/metis.info
@@ -0,0 +1,10 @@
+PRGNAM="metis"
+VERSION="4.0.1"
+HOMEPAGE="http://glaros.dtc.umn.edu/gkhome/metis/metis/overview"
+DOWNLOAD="http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-4.0.tar.gz"
+MD5SUM="0aa546419ff7ef50bd86ce1ec7f727c7"
+DOWNLOAD_x86_64=""
+MD5SUM_x86_64=""
+MAINTAINER="Kyle Guinn"
+EMAIL="elyk03@gmail.com"
+APPROVED="dsomero"
diff --git a/academic/metis/slack-desc b/academic/metis/slack-desc
new file mode 100644
index 0000000000000..9f198406852fe
--- /dev/null
+++ b/academic/metis/slack-desc
@@ -0,0 +1,19 @@
+# HOW TO EDIT THIS FILE:
+# The "handy ruler" below makes it easier to edit a package description.  Line
+# up the first '|' above the ':' following the base package name, and the '|'
+# on the right side marks the last column you can put a character in.  You must
+# make exactly 11 lines for the formatting to be correct.  It's also
+# customary to leave one space after the ':'.
+
+     |-----handy-ruler------------------------------------------------------|
+metis: METIS (serial graph partitioning and fill-reducing matrix ordering)
+metis:
+metis: METIS is a set of serial programs for partitioning graphs,
+metis: partitioning finite element meshes, and producing fill reducing
+metis: orderings for sparse matrices.
+metis:
+metis:
+metis:
+metis:
+metis:
+metis: